RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 MED26O95402 600 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 CATP04040 527 aaKnown RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 FABP3P05413 133 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 YBX1P67809 324 aaKnown RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 NFATC3Q12968 1075 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 ZNF846Q147U1 533 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 ATP6AP1Q15904 470 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 ZNF829Q3KNS6 432 aaPredicted RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 KANK2Q63ZY3 851 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 LCN8Q6JVE9 175 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 ZNF773Q6PK81 442 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 CERS6Q6ZMG9 384 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 GATAD2AQ86YP4 633 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 TMEM126BQ8IUX1 230 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 PACRGLQ8N7B6 248 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 OR4A15Q8NGL6 344 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 C1orf74Q96LT6 269 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 NPLQ9BXD5 320 aaPredicted RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 CACNA1CQ13936 2221 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 ZNF99A8MXY4 864 aaPredicted RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 B3GALT4O96024 378 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 HSD17B1P14061 328 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 RAB15P59190 212 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 NCS1P62166 190 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 MEF2AQ02078 507 aaPredicted RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 CARM1Q86X55 608 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 RHEBL1Q8TAI7 183 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 INPP5KQ9BT40 448 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 DUS2Q9NX74 493 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 RPS6KA6Q9UK32 745 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 SAMD4AQ9UPU9 718 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 OAS3Q9Y6K5 1087 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 MAGEB17A8MXT2 336 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 ADAM12O43184 909 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 AIREO43918 545 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 BCKDHAP12694 445 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 CCL5P13501 91 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 MTHFD2P13995 350 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 RRM2P31350 389 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 SHMT2P34897 504 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 ZC3H12BQ5HYM0 836 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 TMC5Q6UXY8 1006 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 DEF8Q6ZN54 512 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 GPR65Q8IYL9 337 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 PELI3Q8N2H9 469 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 CD200R1Q8TD46 325 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 MAL2Q969L2 176 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 KCNS3Q9BQ31 491 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 COPS4Q9BT78 406 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 UTS2RQ9UKP6 389 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 M0R129 80 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 SMAD6O43541 496 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 SCELO95171 688 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 TGFB1P01137 390 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 VIPP01282 170 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 IGHA2P01877 340 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 IL6P05231 212 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 CD247P20963 164 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 MATN1P21941 496 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 PREPP48147 710 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 EMX2Q04743 252 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 SLC13A2Q13183 592 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 SMN1Q16637 294 aaKnown RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 SETMARQ53H47 684 aaPredicted RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 TJAP1Q5JTD0 557 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 DNAJB7Q7Z6W7 309 aaPredicted RBP13.69□□□□□ -0.22
SDC2-201ENST00000302190 AADATQ8N5Z0 425 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 ZNF614Q8N883 585 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 KCNJ9Q92806 393 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 MTERF3Q96E29 417 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 C8orf48Q96LL4 319 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 CENPOQ9BU64 300 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 DNAJC11Q9NVH1 559 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
SDC2-201ENST00000302190 A0A1W2PRU2 124 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 TARM1B6A8C7 271 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 ASNA1O43681 348 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 OR10H3O60404 316 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 CLPXO76031 633 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 MYF6P23409 242 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 SOX6P35712 828 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 SLC26A3P40879 764 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 CLPPQ16740 277 aaPredicted RBP13.68□□□□□ -0.22
SDC2-201ENST00000302190 CLLU1OSQ5K130 101 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 CCSAPQ6IQ19 270 aaPredicted RBP13.68□□□□□ -0.22
SDC2-201ENST00000302190 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 DCDC5Q6ZRR9 648 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 Q6ZVU0 165 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 ISL2Q96A47 359 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 PRKAB1Q9Y478 270 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 EFCAB10A6NFE3 127 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 ABCB7O75027 752 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 TSC22D2O75157 780 aa13.68□□□□□ -0.22
SDC2-201ENST00000302190 TNNI3P19429 210 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms