RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 AADACL4Q5VUY2 407 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 ZDHHC20Q5W0Z9 365 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 XYLT1Q86Y38 959 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 PHYKPLQ8IUZ5 450 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 SYNPOQ8N3V7 929 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 C12orf50Q8NA57 414 aaPredicted RBP10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 PTPN18Q99952 460 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 HSD17B14Q9BPX1 270 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 TLE6Q9H808 572 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 MTMR10Q9NXD2 777 aa10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 EVLQ9UI08 416 aaPredicted RBP10.52□□□□□ -0.73
PKNOX1-201ENST00000291547 ELOA3DA6NLF2 546 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 GNRH1P01148 92 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 AHCYP23526 432 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 MASP1P48740 699 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ZNF460Q14592 562 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 GANABQ14697 944 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ELOA3BQ3SY89 546 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 SCGB2B2Q4G0G5 96 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TMEM198Q66K66 360 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 LCLAT1Q6UWP7 414 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ELMOD2Q8IZ81 293 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ELOA3Q8NG57 546 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 STOML3Q8TAV4 291 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 MAFIPQ8WZ33 124 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 AKAP1Q92667 903 aaKnown RBP eCLIP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 BTN2A3PQ96KV6 586 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 NUSAP1Q9BXS6 441 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 YTHDF1Q9BYJ9 559 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 OR2AG2A6NM03 316 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 DENRO43583 198 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 PCSK2P16519 638 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 XRCC1P18887 633 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 HK1P19367 917 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 KELP23276 732 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 NMBRP28336 390 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 PUM1Q14671 1186 aaKnown RBP eCLIP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 PARP15Q460N3 678 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TNFAIP8L2Q6P589 184 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 VSTM1Q6UX27 236 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 CXCL17Q6UXB2 119 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 CPNE9Q8IYJ1 553 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 BARD1Q99728 777 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.735e-9■■■■■ 54.8
PKNOX1-201ENST00000291547 PHPT1Q9NRX4 125 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 KIAA1522Q9P206 1035 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D14Q9P2M4 693 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 NR2E3Q9Y5X4 410 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 UBIAD1Q9Y5Z9 338 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ITGA10O75578 1167 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 CLCN4P51793 760 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 GJA9P57773 515 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 VMACQ2NL98 169 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 MINDY4Q4G0A6 757 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TOP6BLQ8N6T0 577 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 LILRB4Q8NHJ6 448 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 RIPOR3Q96MK2 946 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 B3GNT3Q9Y2A9 372 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 IFT52Q9Y366 437 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TRBV23OR9-2A0A075B6M9 112 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3DA0A087WVF3 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3IA0A087WXS9 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3EA0A087X179 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3KA0A087X1G2 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3FA6NER0 549 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3LB9A6J9 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 XPNPEP2O43895 674 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3HP0C7X1 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 MAP3K8P41279 467 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 BRCC3P46736 316 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 OR12D2P58182 307 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 MVKQ03426 396 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3GQ6DHY5 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3CQ6IPX1 549 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 RGMBQ6NW40 437 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 ARL9Q6T311 187 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 TBC1D3Q8IZP1 549 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 SMG7Q92540 1137 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 RBM18Q96H35 190 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC35G5Q96KT7 338 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 HIST1H2AAQ96QV6 131 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 IKZF4Q9H2S9 585 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 PPM1HQ9ULR3 514 aa10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 RUVBL1Q9Y265 456 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-201ENST00000291547 FAM234BA2RU67 622 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CLDN4O14493 209 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC22A2O15244 555 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 VNN2O95498 520 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 C1RP00736 705 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CDH1P12830 882 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 IDSP22304 550 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 STOMP27105 288 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 XKP51811 444 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 LAPTM5Q13571 262 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms