RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 C2P06681 752 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 TUBBP07437 444 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 KCNAB1Q14722 419 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 ZIC1Q15915 447 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 LGSNQ5TDP6 509 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 AGTRAPQ6RW13 159 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 SUSD1Q6UWL2 747 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 OR8K5Q8NH50 307 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 ATL1Q8WXF7 558 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 FBXL8Q96CD0 374 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 FCRL4Q96PJ5 515 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 CCDC77Q9BR77 488 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 PARD6BQ9BYG5 372 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 FGF21Q9NSA1 209 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 ARL15Q9NXU5 204 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 FOXJ2Q9P0K8 574 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 RAB21Q9UL25 225 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 IGF2RP11717 2491 aa25.91■■□□□ 1.74
SSU72-201ENST00000291386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 TAF4O00268 1085 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 MAGP20916 626 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 CCND1P24385 295 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 PSMB5P28074 263 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 TYK2P29597 1187 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 RPA3P35244 121 aaPredicted RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 PCBP4P57723 403 aaKnown RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 TUBB3Q13509 450 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 CSHL1Q14406 222 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 NAA25Q14CX7 972 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 TSNQ15631 228 aaKnown RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.9■■□□□ 1.74
SSU72-201ENST00000291386 KIAA1614Q5VZ46 1190 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 MBOAT1Q6ZNC8 495 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 TBC1D1Q86TI0 1168 aaPredicted RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 SPATA6LQ8N4H0 392 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 PPFIBP2Q8ND30 876 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 UBLCP1Q8WVY7 318 aaPredicted RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 KIAA1191Q96A73 305 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 ZNF501Q96CX3 271 aaPredicted RBP25.9■■□□□ 1.74
SSU72-201ENST00000291386 CTRCQ99895 268 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 SPRY4Q9C004 299 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 KLHL25Q9H0H3 589 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 NMRAL1Q9HBL8 299 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 TLK1Q9UKI8 766 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 RARRES3Q9UL19 164 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 ASPMQ8IZT6 3477 aa25.9■■□□□ 1.74
SSU72-201ENST00000291386 CCDC189A1A4V9 331 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 KRT37O76014 449 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 CCNDBP1O95273 360 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 SNRPAP09012 282 aaKnown RBP25.89■■□□□ 1.74
SSU72-201ENST00000291386 LTA4HP09960 611 aaKnown RBP25.89■■□□□ 1.74
SSU72-201ENST00000291386 CMPK1P30085 196 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 GRIA3P42263 894 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 GABRA4P48169 554 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 ABATP80404 500 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 PRDX1Q06830 199 aaKnown RBP25.89■■□□□ 1.74
SSU72-201ENST00000291386 DLG1Q12959 904 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 TAF1BQ53T94 588 aaPredicted RBP25.89■■□□□ 1.74
SSU72-201ENST00000291386 CDHR3Q6ZTQ4 885 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 PPP1R3BQ86XI6 285 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 FAM20CQ8IXL6 584 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 CAVIN3Q969G5 261 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 MIPEPQ99797 713 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 PCBD2Q9H0N5 130 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 PPCSQ9HAB8 311 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 FAM60AQ9NP50 221 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 CCDC177Q9NQR7 707 aaPredicted RBP25.89■■□□□ 1.74
SSU72-201ENST00000291386 IGSF5Q9NSI5 407 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 ANKMY1Q9P2S6 941 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 APC2O95996 2303 aa25.89■■□□□ 1.74
SSU72-201ENST00000291386 FRYQ5TBA9 3013 aa25.89■■□□□ 1.73
SSU72-201ENST00000291386 ACACAQ13085 2346 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 A0A096LPK6 155 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 ANXA5P08758 320 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 TBPL1P62380 186 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 ZXDCQ2QGD7 858 aaPredicted RBP25.88■■□□□ 1.73
SSU72-201ENST00000291386 CDKL4Q5MAI5 379 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 ICE2Q659A1 982 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 FCRL6Q6DN72 434 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 FIGLAQ6QHK4 219 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 CENPLQ8N0S6 344 aaPredicted RBP25.88■■□□□ 1.73
SSU72-201ENST00000291386 DNAJC22Q8N4W6 341 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 ZNF248Q8NDW4 579 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 OR56A3Q8NH54 315 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 PTERQ96BW5 349 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 MTBPQ96DY7 904 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 SGPP1Q9BX95 441 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 FANCEQ9HB96 536 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 TAC3Q9UHF0 121 aa25.88■■□□□ 1.73
SSU72-201ENST00000291386 HSD17B3P37058 310 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 HNMTP50135 292 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 TGFBIQ15582 683 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 GPR19Q15760 415 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 TIFABQ6ZNK6 161 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 FRA10AC1Q70Z53 315 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 ISCA2Q86U28 154 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 UNKQ9C0B0 810 aaKnown RBP25.87■■□□□ 1.73
SSU72-201ENST00000291386 ATG10Q9H0Y0 220 aa25.87■■□□□ 1.73
SSU72-201ENST00000291386 MRPS30Q9NP92 439 aaKnown RBP25.87■■□□□ 1.73
SSU72-201ENST00000291386 UTP6Q9NYH9 597 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms