RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 C9orf131Q5VYM1 1079 aa15.33■□□□□ 0.05
USP43-201ENST00000285199 FUNDC1Q8IVP5 155 aa15.33■□□□□ 0.05
USP43-201ENST00000285199 FNDC11Q9BVV2 318 aa15.33■□□□□ 0.05
USP43-201ENST00000285199 MOV10Q9HCE1 1003 aaKnown RBP15.33■□□□□ 0.05
USP43-201ENST00000285199 HSFX1Q9UBD0 423 aa15.33■□□□□ 0.05
USP43-201ENST00000285199 FADS2P1A8MWK0 482 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 PIRO00625 290 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 ZNF195O14628 629 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 ESR1P03372 595 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 HOXA11P31270 313 aaPredicted RBP15.33■□□□□ 0.04
USP43-201ENST00000285199 HCAR3P49019 387 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 PTPRRQ15256 657 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 CAMKK2Q96RR4 588 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 CORO1BQ9BR76 489 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 CHIAQ9BZP6 476 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 VRTNQ9H8Y1 702 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 DNAJC11Q9NVH1 559 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 OAS3Q9Y6K5 1087 aaKnown RBP15.33■□□□□ 0.04
USP43-201ENST00000285199 LDB2O43679 373 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 ITGA2P17301 1181 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 OGNP20774 298 aaKnown RBP15.33■□□□□ 0.04
USP43-201ENST00000285199 PROZP22891 400 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 HTR1BP28222 390 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 YBEYP58557 167 aaPredicted RBP15.33■□□□□ 0.04
USP43-201ENST00000285199 DPP10Q8N608 796 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 MAL2Q969L2 176 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 RELTQ969Z4 430 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 SDR39U1Q9NRG7 319 aaPredicted RBP15.33■□□□□ 0.04
USP43-201ENST00000285199 GPR83Q9NYM4 423 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 SEC14L3Q9UDX4 400 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 ADAM30Q9UKF2 790 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 SNX7Q9UNH6 387 aa15.33■□□□□ 0.04
USP43-201ENST00000285199 ZSCAN5BA6NJL1 495 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 H0YJX3 145 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ERN1O75460 977 aaKnown RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 CH25HO95992 272 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 HTR1EP28566 365 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ERVPABLB-1P60509 514 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 EMX1Q04741 257 aaPredicted RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 ATP13A5Q4VNC0 1218 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 KIAA1614Q5VZ46 1190 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 RANBP10Q6VN20 620 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ASCC1Q8N9N2 400 aaKnown RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 NETO1Q8TDF5 533 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TEX37Q96LM6 180 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 I3L521 148 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 GSTM2P28161 218 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TIE1P35590 1138 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 DCTP40126 519 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 PTGER3P43115 390 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 HSPB3Q12988 150 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 LAPTM4BQ86VI4 370 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 UBE2FQ969M7 185 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 EXOSC8Q96B26 276 aaKnown RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 DUSP26Q9BV47 211 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 WDR6Q9NNW5 1121 aaKnown RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 SEMA3GQ9NS98 782 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ANGPT4Q9Y264 503 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 PLK4O00444 970 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 UBFD1O14562 309 aaKnown RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 IFNW1P05000 195 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 CLTBP09497 229 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 SCNN1AP37088 669 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TARDBPQ13148 414 aaKnown RBP eCLIP15.32■□□□□ 0.04
USP43-201ENST00000285199 SF1Q15637 639 aaKnown RBP15.32■□□□□ 0.04
USP43-201ENST00000285199 KCTD13Q8WZ19 329 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 IGSF8Q969P0 613 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TMCO6Q96DC7 493 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 SLC30A2Q9BRI3 323 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TJP1Q07157 1748 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TGFB1P01137 390 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 FHP07954 510 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 FSHRP23945 695 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 MAGEA3P43357 314 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 SF3B4Q15427 424 aaKnown RBP eCLIP15.32■□□□□ 0.04
USP43-201ENST00000285199 LETMD1Q6P1Q0 360 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 USP45Q70EL2 814 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 STARD8Q92502 1023 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 NCSTNQ92542 709 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ZNF599Q96NL3 588 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 PTPN18Q99952 460 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 TTPALQ9BTX7 342 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 RHBGQ9H310 441 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 MS4A12Q9NXJ0 267 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ING4Q9UNL4 249 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 ERVK-11Q9UQG0 969 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 PCDHGB3Q9Y5G1 929 aa15.32■□□□□ 0.04
USP43-201ENST00000285199 PRAMEF33A0A0G2JMD5 474 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 SCAMP1O15126 338 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 ADAMDEC1O15204 470 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 PRAMEF10O60809 474 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 FPR1P21462 350 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 EMX2Q04743 252 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 CACNG1Q06432 222 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 FOXM1Q08050 763 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 CDK5R2Q13319 367 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 IQCCQ4KMZ1 466 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 MS4A13Q5J8X5 152 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 CYP4Z2PQ8N1L4 340 aa15.31■□□□□ 0.04
USP43-201ENST00000285199 YIPF4Q9BSR8 244 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms