RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 RPF2Q9H7B2 306 aaKnown RBP17.41■□□□□ 0.38
CAPN1-201ENST00000279247 ASF1AQ9Y294 204 aa17.41■□□□□ 0.38
CAPN1-201ENST00000279247 MAGEA13PA6NCF6 341 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 C1QCP02747 245 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 PHC1P78364 1004 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 INPP5AQ14642 412 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 KIAA0040Q15053 153 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 PDK3Q15120 406 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 GLYATQ6IB77 296 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 OR10Q1Q8NGQ4 319 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 GATA6Q92908 595 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 GLMNQ92990 594 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 FBXL8Q96CD0 374 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 MRPL38Q96DV4 380 aaKnown RBP17.4■□□□□ 0.38
CAPN1-201ENST00000279247 INPP5KQ9BT40 448 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 BATF3Q9NR55 127 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 ACTR3BQ9P1U1 418 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 KCNE1BA0A087WTH5 132 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 SMNDC1O75940 238 aaKnown RBP eCLIP17.4■□□□□ 0.38
CAPN1-201ENST00000279247 SDC1P18827 310 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 IGFBP4P22692 258 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 RAB30Q15771 203 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 CMPK2Q5EBM0 449 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 ATAT1Q5SQI0 421 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 RNF220Q5VTB9 566 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 DSG4Q86SJ6 1040 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 NRSN1Q8IZ57 195 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 HDDC3Q8N4P3 179 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 AADATQ8N5Z0 425 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 TSPEARQ8WU66 669 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 ZNF480Q8WV37 535 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 GTF2H4Q92759 462 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 RNF145Q96MT1 663 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 CENPKQ9BS16 269 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 CLDND1Q9NY35 253 aa17.4■□□□□ 0.38
CAPN1-201ENST00000279247 MAGEB17A8MXT2 336 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 QSOX1O00391 747 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 IL10P22301 178 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 S100A3P33764 101 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 TBPL1P62380 186 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 BNIP2Q12982 314 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 COQ5Q5HYK3 327 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 OR4F3Q6IEY1 312 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 IYDQ6PHW0 289 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 ZBTB49Q6ZSB9 765 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 OR7A2PQ8NGA2 310 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 CCDC138Q96M89 665 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 TRIM15Q9C019 465 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 ZCCHC2Q9C0B9 1178 aaKnown RBP17.39■□□□□ 0.38
CAPN1-201ENST00000279247 VCXQ9H320 206 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 OSGEPL1Q9H4B0 414 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 TRIM39Q9HCM9 518 aa17.39■□□□□ 0.38
CAPN1-201ENST00000279247 SLC16A5O15375 505 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 ETHE1O95571 254 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 PWP1Q13610 501 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 CAPRIN2Q6IMN6 1127 aaKnown RBP17.39■□□□□ 0.37
CAPN1-201ENST00000279247 SYT12Q8IV01 421 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 ADCY4Q8NFM4 1077 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 FBXO30Q8TB52 745 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 ZNF576Q9H609 170 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 THAP10Q9P2Z0 257 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-201ENST00000279247 SLC23A2Q9UGH3 650 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 FADS3Q9Y5Q0 445 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 H0Y858 1186 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 PSMD11O00231 422 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 GSTA4O15217 222 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 C1orf105O95561 183 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 APODP05090 189 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 JUPP14923 745 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 DRD3P35462 400 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 DTWD1Q8N5C7 304 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 NCLNQ969V3 563 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 SLC25A37Q9NYZ2 338 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 GPRC5BQ9NZH0 403 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 PPT2Q9UMR5 302 aa17.39■□□□□ 0.37
CAPN1-201ENST00000279247 C7orf72A4D263 438 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 FOXM1Q08050 763 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 KIAA1211LQ6NV74 962 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 NOXRED1Q6NXP6 359 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 FAM124AQ86V42 546 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 L3MBTL4Q8NA19 623 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 OR5AR1Q8NGP9 310 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 PNPT1Q8TCS8 783 aaKnown RBP17.38■□□□□ 0.37
CAPN1-201ENST00000279247 FZD3Q9NPG1 666 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 MBNL1Q9NR56 388 aaKnown RBP17.38■□□□□ 0.37
CAPN1-201ENST00000279247 HRH2P25021 359 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 CDKN2CP42773 168 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 PLOD1Q02809 727 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-201ENST00000279247 ACSM2AQ08AH3 577 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 COL9A2Q14055 689 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-201ENST00000279247 CST6Q15828 149 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 PIP5KL1Q5T9C9 394 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 ACSM2BQ68CK6 577 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 DUS1LQ6P1R4 473 aaKnown RBP17.38■□□□□ 0.37
CAPN1-201ENST00000279247 TRMT61BQ9BVS5 477 aaKnown RBP17.38■□□□□ 0.37
CAPN1-201ENST00000279247 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 UBAP1Q9NZ09 502 aa17.38■□□□□ 0.37
CAPN1-201ENST00000279247 RNF103-CHMP3A0A140T963 221 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 SOCS2O14508 198 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 NPC1O15118 1278 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms