RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CSTF3Q12996 717 aaKnown RBP24.37■■□□□ 1.49
ROM1-201ENST00000278833 CPSF6Q16630 551 aaKnown RBP eCLIP24.37■■□□□ 1.49
ROM1-201ENST00000278833 CARD16Q5EG05 197 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 DET1Q7L5Y6 550 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 SERPINA11Q86U17 422 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 BHMTQ93088 406 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 HIST1H2AHQ96KK5 128 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 HIST1H2AJQ99878 128 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 H2AFJQ9BTM1 129 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 TMPRSS11EQ9UL52 423 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 GRM6O15303 877 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 SLC16A6O15403 523 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 ITGAMP11215 1152 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 DCTP40126 519 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 PLIN5Q00G26 463 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 CHPFQ8IZ52 775 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 ZNF566Q969W8 418 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 FBXL8Q96CD0 374 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 NRBF2Q96F24 287 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 PYURFQ96I23 114 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 AMBRA1Q9C0C7 1298 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 SLC6A13Q9NSD5 602 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 SLC25A13Q9UJS0 675 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 PPT2Q9UMR5 302 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 A0A0J9YVX5 310 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 LEFTY2O00292 366 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 ATP1B2P14415 290 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 JUPP14923 745 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 AMD1P17707 334 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 ELK4P28324 431 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 CTSOP43234 321 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 ZIK1Q3SY52 487 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 XAF1Q6GPH4 301 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 FAM109BQ6ICB4 259 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 NEK5Q6P3R8 708 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 DNAJC14Q6Y2X3 702 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 GCNT7Q6ZNI0 430 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 GPR155Q7Z3F1 870 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 CPA6Q8N4T0 437 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 ZNF557Q8N988 423 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 CHDHQ8NE62 594 aaPredicted RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 NELL1Q92832 810 aa24.36■■□□□ 1.49
ROM1-201ENST00000278833 SAMD4AQ9UPU9 718 aaKnown RBP24.36■■□□□ 1.49
ROM1-201ENST00000278833 PTPRSQ13332 1948 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 NOL3O60936 208 aaKnown RBP24.35■■□□□ 1.49
ROM1-201ENST00000278833 CCNDBP1O95273 360 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 RYKP34925 604 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 STK19P49842 368 aaPredicted RBP24.35■■□□□ 1.49
ROM1-201ENST00000278833 PTCHD3Q3KNS1 767 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 C6orf141Q5SZD1 244 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 GPR107Q5VW38 600 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 LIPJQ5W064 366 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 FRG2Q64ET8 278 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 FRG2BQ96QU4 278 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 BRD9Q9H8M2 597 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 MAGED1Q9Y5V3 778 aaPredicted RBP24.35■■□□□ 1.49
ROM1-201ENST00000278833 AP1M2Q9Y6Q5 423 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 CDH23Q9H251 3354 aa24.35■■□□□ 1.49
ROM1-201ENST00000278833 PABPN1LA6NDY0 278 aaKnown RBP24.34■■□□□ 1.49
ROM1-201ENST00000278833 PRPS1L1P21108 318 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 HLA-FP30511 346 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 PPM1AP35813 382 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 POLR2IP36954 125 aaKnown RBP24.34■■□□□ 1.49
ROM1-201ENST00000278833 SHQ1Q6PI26 577 aaKnown RBP24.34■■□□□ 1.49
ROM1-201ENST00000278833 TMEM26Q6ZUK4 368 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 TBCDQ9BTW9 1192 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 GPN2Q9H9Y4 310 aaPredicted RBP24.34■■□□□ 1.49
ROM1-201ENST00000278833 B4GALT6Q9UBX8 382 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 SZT2Q5T011 3432 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 GRXCR1A8MXD5 290 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 SERPINA1P01009 418 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 RAD23AP54725 363 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 POLR2LP62875 67 aaKnown RBP24.34■■□□□ 1.49
ROM1-201ENST00000278833 KCNAB2Q13303 367 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 DMC1Q14565 340 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 ZNF691Q5VV52 312 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 GTF2IRD2BQ6EKJ0 949 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 ERICH5Q6P6B1 374 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 GTF2IRD2Q86UP8 949 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 PHACTR4Q8IZ21 702 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 CLHC1Q8NHS4 586 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 PHOSPHO2Q8TCD6 241 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 RAB2BQ8WUD1 216 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 NCLNQ969V3 563 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 PPP1R14BQ96C90 147 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 SMURF2Q9HAU4 748 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 RAD18Q9NS91 495 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 ERVW-1Q9UQF0 538 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 PCDHGA8Q9Y5G5 932 aa24.34■■□□□ 1.49
ROM1-201ENST00000278833 TSPAN11A1L157 253 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 CFAP99D6REC4 459 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 QSOX1O00391 747 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 GNGT2O14610 69 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 SEMG1P04279 462 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 HSD3B1P14060 373 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 HSD3B2P26439 372 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 YAP1P46937 504 aaKnown RBP24.33■■□□□ 1.49
ROM1-201ENST00000278833 SRSF11Q05519 484 aaKnown RBP24.33■■□□□ 1.49
ROM1-201ENST00000278833 MCOLN3Q8TDD5 553 aa24.33■■□□□ 1.49
ROM1-201ENST00000278833 NETO1Q8TDF5 533 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms