RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SPATA22Q8NHS9 363 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 TFB1MQ8WVM0 346 aaKnown RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 DNAJC7Q99615 494 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 C19orf43Q9BQ61 176 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 IL26Q9NPH9 171 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 TLK1Q9UKI8 766 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 ACSL5Q9ULC5 683 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 IGHV5-51A0A0C4DH38 117 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 OR5K3A6NET4 321 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 POP7O75817 140 aaKnown RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 MTHFD1P11586 935 aaKnown RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 ZNF20P17024 532 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 LPOP22079 712 aaPredicted RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PTPN3P26045 913 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PTPN4P29074 926 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PGDP52209 483 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 XRCC4Q13426 336 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PRKD1Q15139 912 aaPredicted RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 RPE65Q16518 533 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 ASTE1Q2TB18 679 aaPredicted RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 KHDC1Q4VXA5 237 aaKnown RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 IZUMO3Q5VZ72 239 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 METRNLQ641Q3 311 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 VASNQ6EMK4 673 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PWWP2BQ6NUJ5 590 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 ZNF517Q6ZMY9 492 aaPredicted RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 D2HGDHQ8N465 521 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 CT55Q8WUE5 264 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 CPT1BQ92523 772 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 P3H4Q92791 437 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 ELMO2Q96JJ3 720 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 CCDC42Q96M95 316 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 FCRL5Q96RD9 977 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 KCNJ15Q99712 375 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 FSD1LQ9BXM9 530 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PACSIN1Q9BY11 444 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 KCND1Q9NSA2 647 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
LRTM1-201ENST00000273286 IL17CQ9P0M4 197 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 IFNKQ9P0W0 207 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 TRHDEQ9UKU6 1024 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 INTUQ9ULD6 942 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 PLAAQ9Y263 795 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 WDR37Q9Y2I8 494 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 SPO11Q9Y5K1 396 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 HEBP2Q9Y5Z4 205 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 COLEC10Q9Y6Z7 277 aa9.4□□□□□ -0.9
LRTM1-201ENST00000273286 MGAT4DA6NG13 374 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 PSTPIP1O43586 416 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 SPOPO43791 374 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 SCRG1O75711 98 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 ZNF189O75820 626 aaPredicted RBP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 ANXA9O76027 345 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 RAB40ALP0C0E4 278 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 SLC35G4P0C7Q5 338 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 RALBP11234 206 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 COL6A2P12110 1019 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 FOLR1P15328 257 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 MSH3P20585 1137 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 AKT1P31749 480 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 WNT3AP56704 352 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 PRKAA1Q13131 559 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 SLC1A5Q15758 541 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 CHRNA6Q15825 494 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 GPRC6AQ5T6X5 926 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 PAPD7Q5XG87 772 aaKnown RBP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 PID1Q7Z2X4 250 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 TMEM126BQ8IUX1 230 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 TTC30BQ8N4P2 665 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 RASGEF1AQ8N9B8 481 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 HEXDCQ8WVB3 486 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 LRRC45Q96CN5 670 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 LINC00615Q96LM1 132 aaPredicted RBP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 PPP1R2P1Q96PQ5 205 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 MAP3K3Q99759 626 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 CCM2Q9BSQ5 444 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 SLC25A23Q9BV35 468 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 KIR3DX1Q9H7L2 352 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 BPIFA1Q9NP55 256 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 MLXIPLQ9NP71 852 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 ACSS2Q9NR19 701 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 HRASLS2Q9NWW9 162 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 KLHL8Q9P2G9 620 aaPredicted RBP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 TRIM10Q9UDY6 481 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 TMPRSS11EQ9UL52 423 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 FARSAQ9Y285 508 aaKnown RBP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 BTRCQ9Y297 605 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 BLACEA4D250 179 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 OR2AG2A6NM03 316 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 C2orf81A6NN90 581 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 HACD1B0YJ81 288 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
LRTM1-201ENST00000273286 KLHL41O60662 606 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 DPM1O60762 260 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 CDKN2BP42772 138 aa9.39□□□□□ -0.91
LRTM1-201ENST00000273286 RRADP55042 308 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms