RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ING5Q8WYH8 240 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 MARK4Q96L34 752 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 CATSPER2Q96P56 530 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 FRG2BQ96QU4 278 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 CD244Q9BZW8 370 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 MVB12BQ9H7P6 319 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 SNX7Q9UNH6 387 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 CAPN14A8MX76 684 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 RPS14P62263 151 aaKnown RBP8.03□□□□□ -1.12
PTPN3-201ENST00000262539 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPN3-201ENST00000262539 DUSP6Q16828 381 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 BCL7AQ4VC05 210 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 KANK2Q63ZY3 851 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 TRIM40Q6P9F5 258 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 CRTC1Q6UUV9 634 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 GPR149Q86SP6 731 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 OR14C36Q8NHC7 312 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 BADQ92934 168 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 FUBP1Q96AE4 644 aaKnown RBP8.03□□□□□ -1.12
PTPN3-201ENST00000262539 RACGAP1Q9H0H5 632 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 ACTR3BQ9P1U1 418 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 RAB26Q9ULW5 256 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 DMTF1Q9Y222 760 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 SPO11Q9Y5K1 396 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 HCFC2Q9Y5Z7 792 aa8.03□□□□□ -1.12
PTPN3-201ENST00000262539 SBF1O95248 1867 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 PRODHO43272 600 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 RNASEH2AO75792 299 aaKnown RBP8.02□□□□□ -1.12
PTPN3-201ENST00000262539 KAT7O95251 611 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 PIRTP0C851 137 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 HNRNPLP14866 589 aaKnown RBP eCLIP8.02□□□□□ -1.12
PTPN3-201ENST00000262539 HNF1BP35680 557 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 EOGTQ5NDL2 527 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 LINGO4Q6UY18 593 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 ZFAND4Q86XD8 727 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF778Q96MU6 729 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 PCED1AQ9H1Q7 454 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 P2RY12Q9H244 342 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 CLK4Q9HAZ1 481 aaKnown RBP8.02□□□□□ -1.12
PTPN3-201ENST00000262539 POLMQ9NP87 494 aaPredicted RBP8.02□□□□□ -1.12
PTPN3-201ENST00000262539 NCDNQ9UBB6 729 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 LRRC42Q9Y546 428 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 SESN1Q9Y6P5 492 aa8.02□□□□□ -1.12
PTPN3-201ENST00000262539 TRIM64A6NGJ6 449 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 H3BNX3 289 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 RNGTTO60942 597 aaKnown RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 DLGAP3O95886 979 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 GGT5P36269 586 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ABCG1P45844 678 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CDH13P55290 713 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 LRRC26Q2I0M4 334 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CDC73Q6P1J9 531 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 MED27Q6P2C8 311 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 PACS2Q86VP3 889 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 L3MBTL4Q8NA19 623 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 C19orf18Q8NEA5 215 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 NUS1Q96E22 293 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 GSTO2Q9H4Y5 243 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TRIM39Q9HCM9 518 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ADPRHL2Q9NX46 363 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 FAM20BO75063 409 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CTBSQ01459 385 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 PCDH1Q08174 1060 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ILF3Q12906 894 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TOP3AQ13472 1001 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 SUZ12Q15022 739 aaKnown RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 C6orf136Q5SQH8 315 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 USP30Q70CQ3 517 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CIR1Q86X95 450 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 SYNPOQ8N3V7 929 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 WDR55Q9H6Y2 383 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 MARCH4Q9P2E8 410 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ZNF780BQ9Y6R6 833 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 IGLV3-16A0A075B6K0 115 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TNFAIP8O95379 198 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 SYN1P17600 705 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ARNTP27540 789 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 PTSQ03393 145 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 RAPSNQ13702 412 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 GPNMBQ14956 572 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 ATXN7L2Q5T6C5 722 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CGB2Q6NT52 195 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TMEM173Q86WV6 379 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CCDC103Q8IW40 242 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 MFSD6LQ8IWD5 586 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TTC29Q8NA56 475 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 OR2T34Q8NGX1 318 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 OR2T3Q8NH03 318 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 KCNK13Q9HB14 408 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 HHATLQ9HCP6 504 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 IMP3Q9NV31 184 aaKnown RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 PLK2Q9NYY3 685 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 THAP10Q9P2Z0 257 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 C3orf18Q9UK00 162 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 TRIM43BA6NCK2 446 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 NIPSNAP2O75323 286 aa8.02□□□□□ -1.13
PTPN3-201ENST00000262539 SMNDC1O75940 238 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPN3-201ENST00000262539 CTPS1P17812 591 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms