RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CCDC68Q9H2F9 335 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF552Q9H707 407 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 WDR54Q9H977 334 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF304Q9HCX3 659 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 FAM114A2Q9NRY5 505 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 SEMA3GQ9NS98 782 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 ABCF3Q9NUQ8 709 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 COL12A1Q99715 3063 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 A0A0U1RQJ8 604 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 HYKKA2RU49 373 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF839A8K0R7 811 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 TARM1B6A8C7 271 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 MASP2O00187 686 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 MAP2K7O14733 419 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 PRPF4O43172 522 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■□□□□ 9.2
TRAF4-202ENST00000262396 ALOX12BO75342 701 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 SLCO2B1O94956 709 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 VAPBO95292 243 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 C1orf105O95561 183 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 UMODP07911 640 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 ANXA5P08758 320 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 TPBGLP0DKB5 382 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 FBLP22087 321 aaKnown RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 MGAT1P26572 445 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 ACVR1Q04771 509 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 FLNCQ14315 2725 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 CCNG2Q16589 344 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 HIF1AQ16665 826 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 TTLL9Q3SXZ7 439 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 ADCK2Q7Z695 626 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 FLVCR1-AS1Q8TAF5 88 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 COG1Q8WTW3 980 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 RERGQ96A58 199 aaPredicted RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 THOC3Q96J01 351 aaKnown RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 MAGEB10Q96LZ2 347 aaPredicted RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 LHPPQ9H008 270 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 SLC6A20Q9NP91 592 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 EIF2B3Q9NR50 452 aaKnown RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 SPATA7Q9P0W8 599 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 MARCH4Q9P2E8 410 aaPredicted RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF282Q9UDV7 671 aaPredicted RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 CDC14AQ9UNH5 594 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 RUVBL2Q9Y230 463 aaKnown RBP11.73□□□□□ -0.53
TRAF4-202ENST00000262396 SLC5A6Q9Y289 635 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 NFS1Q9Y697 457 aa11.73□□□□□ -0.53
TRAF4-202ENST00000262396 SPTBP11277 2137 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 CTAGE9A4FU28 777 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 GOLGA8KD6RF30 607 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 GOLGA8TH3BQL2 631 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 CEP104O60308 925 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 CCNDBP1O95273 360 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 SYF2O95926 243 aaKnown RBP11.72□□□□□ -0.53
TRAF4-202ENST00000262396 CATP04040 527 aaKnown RBP11.72□□□□□ -0.53
TRAF4-202ENST00000262396 ACPPP15309 386 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 NMBRP28336 390 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 PER3P56645 1201 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 ARG2P78540 354 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 THOC5Q13769 683 aaKnown RBP11.72□□□□□ -0.53
TRAF4-202ENST00000262396 NKG7Q16617 165 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 ANKRD20A4Q4UJ75 823 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 FCRL6Q6DN72 434 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 PRMT9Q6P2P2 845 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 CES3Q6UWW8 571 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 IGFL3Q6UXB1 125 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 LINC00696Q6ZRV3 163 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 MAMDC2Q7Z304 686 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-202ENST00000262396 MRPS30Q9NP92 439 aaKnown RBP11.72□□□□□ -0.53
TRAF4-202ENST00000262396 LZTFL1Q9NQ48 299 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 HOMER3Q9NSC5 361 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 C3orf18Q9UK00 162 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 CRYL1Q9Y2S2 319 aa11.72□□□□□ -0.53
TRAF4-202ENST00000262396 NSG1A0A0A6YYJ2 146 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 DYTNA2CJ06 578 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
TRAF4-202ENST00000262396 H3BMH7 237 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 CNOT3O75175 753 aaKnown RBP11.71□□□□□ -0.53
TRAF4-202ENST00000262396 FGGP02679 453 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 RPS3P23396 243 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAF4-202ENST00000262396 PSMB5P28074 263 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 CDC25BP30305 580 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 VPS41P49754 854 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF169Q14929 603 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-202ENST00000262396 TLR1Q15399 786 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 TRIP13Q15645 432 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-202ENST00000262396 FAM180AQ6UWF9 173 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 ISLR2Q6UXK2 745 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 OR2L3Q8NG85 312 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 OR9A1PQ8NGU1 263 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 PPP4R1Q8TF05 950 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 SMPDL3AQ92484 453 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 TCF12Q99081 682 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 ZFYVE21Q9BQ24 234 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 DPH7Q9BTV6 452 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF160Q9HCG1 818 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 TRPC4Q9UBN4 977 aa11.71□□□□□ -0.53
TRAF4-202ENST00000262396 CTSFQ9UBX1 484 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms