RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 OR4L1Q8NH43 312 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 DLG3Q92796 817 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 ALS2CR12Q96Q35 445 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 NDC1Q9BTX1 674 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 ZNF395Q9H8N7 513 aaPredicted RBP9.89□□□□□ -0.83
VPS50-201ENST00000251739 ETNK1Q9HBU6 452 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 CASS4Q9NQ75 786 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 MARCH4Q9P2E8 410 aaPredicted RBP9.89□□□□□ -0.83
VPS50-201ENST00000251739 NDOR1Q9UHB4 597 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 GPN3Q9UHW5 284 aaPredicted RBP9.89□□□□□ -0.83
VPS50-201ENST00000251739 KLHL20Q9Y2M5 609 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 TCAF1Q9Y4C2 921 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 CAPN6Q9Y6Q1 641 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 PCNX1Q96RV3 2341 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 OTOGQ6ZRI0 2925 aa9.89□□□□□ -0.83
VPS50-201ENST00000251739 E2F3O00716 465 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 RASGRF2O14827 1237 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 DSCR3O14972 297 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 CTSVO60911 334 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 FKBP9O95302 570 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 CLDN1O95832 211 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 ALBP02768 609 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 ADRA1DP25100 572 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 STIP1P31948 543 aaKnown RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 ARSFP54793 590 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 HSPA14Q0VDF9 509 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 AIMP2Q13155 320 aaKnown RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 YOD1Q5VVQ6 348 aaPredicted RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 TTLL10Q6ZVT0 673 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 OVCH1Q7RTY7 1134 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 MAMDC2Q7Z304 686 aaPredicted RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 MCATQ8IVS2 390 aaKnown RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 CISD2Q8N5K1 135 aaKnown RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 DNAAF3Q8N9W5 541 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 HMGCLL1Q8TB92 370 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 DENND1AQ8TEH3 1009 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 PPP4R1Q8TF05 950 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 ASZ1Q8WWH4 475 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 TM9SF4Q92544 642 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 SLC22A18Q96BI1 424 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 IL17FQ96PD4 163 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 WDR77Q9BQA1 342 aaPredicted RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 FRMD8P1Q9BZ68 369 aaPredicted RBP9.88□□□□□ -0.83
VPS50-201ENST00000251739 P2RY12Q9H244 342 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 TREX1Q9NSU2 369 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 CTSFQ9UBX1 484 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 FBXL4Q9UKA2 621 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 PCDHGA11Q9Y5H2 935 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 CSAG2Q9Y5P2 127 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 HS3ST3B1Q9Y662 390 aa9.88□□□□□ -0.83
VPS50-201ENST00000251739 SCN2AQ99250 2005 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 A1L4Q6 167 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 ANKUB1A6NFN9 424 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 VSTM2BA6NLU5 285 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 IQCF5A8MTL0 148 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 F8W8V4 182 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 PRMT5O14744 637 aaPredicted RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 NRP2O60462 931 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 MED26O95402 600 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 RPN2P04844 631 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 APOA4P06727 396 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 RPS3P23396 243 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS50-201ENST00000251739 MCM3P25205 808 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 TSFMP43897 325 aaKnown RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 CSE1LP55060 971 aaKnown RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 GBX1Q14549 363 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 SIX1Q15475 284 aaPredicted RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 CYP2A13Q16696 494 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 AARS2Q5JTZ9 985 aaKnown RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 TCTE1Q5JU00 501 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 PRAMEF13Q5VWM6 474 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 MYO7BQ6PIF6 2116 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 FIGLAQ6QHK4 219 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 KIRREL2Q6UWL6 708 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 KIAA1328Q86T90 577 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 LDB1Q86U70 411 aaPredicted RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 MPP5Q8N3R9 675 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 DTWD1Q8N5C7 304 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 TTC1Q99614 292 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 MESP1Q9BRJ9 268 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 DESI2Q9BSY9 194 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 ILKAPQ9H0C8 392 aaPredicted RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 MRM3Q9HC36 420 aaKnown RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 CUTCQ9NTM9 273 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 CIDEBQ9UHD4 219 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 NXT1Q9UKK6 140 aaKnown RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 NOVA2Q9UNW9 492 aaKnown RBP9.87□□□□□ -0.83
VPS50-201ENST00000251739 TACC2O95359 2948 aa9.87□□□□□ -0.83
VPS50-201ENST00000251739 FBN2P35556 2912 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 PKDREJQ9NTG1 2253 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 IGLV3-12A0A075B6K2 115 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 A0A1W2PPV9 198 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 A0A1W2PQ72 361 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 TARM1B6A8C7 271 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 ALOX12BO75342 701 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 IFNB1P01574 187 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 PTMAP06454 111 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 ARNTP27540 789 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms