RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 V9GYQ6 96 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 PIKFYVEQ9Y2I7 2098 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 SLC5A10A0PJK1 596 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 H0Y858 1186 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 PSMD11O00231 422 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 XYLBO75191 536 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 CREG1O75629 220 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 SNAP29O95721 258 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 PRPS1L1P21108 318 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ITPKAP23677 461 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 MMP12P39900 470 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 MTHFRP42898 656 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 TRPC1P48995 793 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 PRLHRP49683 370 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 CDK9P50750 372 aaKnown RBP15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ABHD18Q0P651 414 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 PPIGQ13427 754 aaKnown RBP eCLIP15.71■□□□□ 0.11
UBE3D-201ENST00000237186 NKG7Q16617 165 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 TMEM214Q6NUQ4 689 aaKnown RBP15.71■□□□□ 0.11
UBE3D-201ENST00000237186 CYP2U1Q7Z449 544 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 GPR180Q86V85 440 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 NLRP8Q86W28 1048 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 FAM86B1Q8N7N1 296 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 NAT16Q8N8M0 369 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 GLYATL1Q969I3 302 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 C11orf24Q96F05 449 aaPredicted RBP15.71■□□□□ 0.11
UBE3D-201ENST00000237186 REXO5Q96IC2 774 aaKnown RBP15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ZSWIM3Q96MP5 696 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 TSSK3Q96PN8 268 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ATG10Q9H0Y0 220 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 SPATA6Q9NWH7 488 aaPredicted RBP15.71■□□□□ 0.11
UBE3D-201ENST00000237186 USE1Q9NZ43 259 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 LIMD1Q9UGP4 676 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ZFC3H1O60293 1989 aaKnown RBP15.7■□□□□ 0.1
UBE3D-201ENST00000237186 CCDC160A6NGH7 325 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 ARHGEF33A8MVX0 844 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 HSD3B1P14060 373 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 HSD3B2P26439 372 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 MAP4P27816 1152 aaKnown RBP15.7■□□□□ 0.1
UBE3D-201ENST00000237186 HALP42357 657 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 IRF8Q02556 426 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 E2F2Q14209 437 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 PON2Q15165 354 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 ENPP6Q6UWR7 440 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 LIPIQ6XZB0 460 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 THOC6Q86W42 341 aaKnown RBP15.7■□□□□ 0.1
UBE3D-201ENST00000237186 ZDHHC13Q8IUH4 622 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 PHACTR4Q8IZ21 702 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 SVOPLQ8N434 492 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 WFIKKN2Q8TEU8 576 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 SORCS1Q8WY21 1168 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 MPP4Q96JB8 637 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 APOLD1Q96LR9 279 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 EPHX3Q9H6B9 360 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 PRKAG2Q9UGJ0 569 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 RSL24D1Q9UHA3 163 aaKnown RBP15.7■□□□□ 0.1
UBE3D-201ENST00000237186 HELZP42694 1942 aaKnown RBP15.7■□□□□ 0.1
UBE3D-201ENST00000237186 PTPRSQ13332 1948 aa15.7■□□□□ 0.1
UBE3D-201ENST00000237186 TMEM202A6NGA9 273 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 OR2AG2A6NM03 316 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 H0YIV9 168 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 PER2O15055 1255 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 ATG13O75143 517 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 ALBP02768 609 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 POU2F2P09086 479 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 CD22P20273 847 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 HNF4AP41235 474 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 CTSCP53634 463 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 CDH15P55291 814 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 UBE3AQ05086 875 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 SRSF11Q05519 484 aaKnown RBP15.69■□□□□ 0.1
UBE3D-201ENST00000237186 ABRQ12979 859 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 DHCR24Q15392 516 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 SLC44A4Q53GD3 710 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.69■□□□□ 0.1
UBE3D-201ENST00000237186 AGTRAPQ6RW13 159 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 DNAJC14Q6Y2X3 702 aaPredicted RBP15.69■□□□□ 0.1
UBE3D-201ENST00000237186 GCNT7Q6ZNI0 430 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 PGBD3Q8N328 593 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 RASGEF1AQ8N9B8 481 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 FBXO30Q8TB52 745 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 BADQ92934 168 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 FAM162AQ96A26 154 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 TMEM159Q96B96 161 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 TMIGD2Q96BF3 282 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 FAM120BQ96EK7 910 aaKnown RBP15.69■□□□□ 0.1
UBE3D-201ENST00000237186 SLC47A1Q96FL8 570 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 AURKBQ96GD4 344 aaPredicted RBP15.69■□□□□ 0.1
UBE3D-201ENST00000237186 CCM2Q9BSQ5 444 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 INPP5KQ9BT40 448 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 TBCDQ9BTW9 1192 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 VPS29Q9UBQ0 182 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 G3V2T6 193 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 ZNF701M0R085 212 aaPredicted RBP15.69■□□□□ 0.1
UBE3D-201ENST00000237186 ZNF197O14709 1029 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 NPC1O15118 1278 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 TSPAN6O43657 245 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 SCN2BO60939 215 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 PRKD3O94806 890 aa15.69■□□□□ 0.1
UBE3D-201ENST00000237186 CATP04040 527 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms