RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 FBXO15Q8NCQ5 510 aaPredicted RBP16.38■□□□□ 0.21
GAPDH-201ENST00000229239 ITFG1Q8TB96 612 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 SUSD6Q92537 303 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 SMG7Q92540 1137 aaKnown RBP16.38■□□□□ 0.21
GAPDH-201ENST00000229239 DTD2Q96FN9 168 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 FCRL1Q96LA6 429 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 COQ10AQ96MF6 247 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 TRIM8Q9BZR9 551 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 DZANK1Q9NVP4 752 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 NEUROG3Q9Y4Z2 214 aa16.38■□□□□ 0.21
GAPDH-201ENST00000229239 EDDM13A0A1B0GTR0 161 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 SCELO95171 688 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 RASAL1O95294 804 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 HNF4AP41235 474 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 OR4D2P58180 307 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 MYBPC1Q00872 1141 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 PLOD1Q02809 727 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-201ENST00000229239 CYP4F3Q08477 520 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 TMEM115Q12893 351 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-201ENST00000229239 BCL7AQ4VC05 210 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 RUNDC3AQ59EK9 446 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 LRIF1Q5T3J3 769 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 KRT80Q6KB66 452 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 NLRP8Q86W28 1048 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 RASGEF1AQ8N9B8 481 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 OR2T12Q8NG77 320 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 BPIFB1Q8TDL5 484 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 OR8D1Q8WZ84 308 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 TFAP2CQ92754 450 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 ITCHQ96J02 903 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 LRRC3BQ96PB8 259 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 OR52E6Q96RD3 313 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 VAPAQ9P0L0 249 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 A0A096LPI6 279 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 RNF103-CHMP3A0A140T963 221 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 OR2AG2A6NM03 316 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 ARHGEF33A8MVX0 844 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 SOCS2O14508 198 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 TSPAN6O43657 245 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 DEAF1O75398 565 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-201ENST00000229239 RAP2AP10114 183 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 NCK1P16333 377 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 CKMT2P17540 419 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 S100A3P33764 101 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 MTPNP58546 118 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 ABRQ12979 859 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 CHIT1Q13231 466 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 CES5AQ6NT32 575 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 SLC22A15Q8IZD6 547 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 BEND7Q8N7W2 519 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-201ENST00000229239 ZNF514Q96K75 400 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-201ENST00000229239 ZNF583Q96ND8 569 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 OBP2AQ9NY56 170 aa16.37■□□□□ 0.21
GAPDH-201ENST00000229239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.37■□□□□ 0.21
GAPDH-201ENST00000229239 TRBV5-3A0A0A0MS03 114 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 C19orf67A6NJJ6 358 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 KPNA3O00505 521 aaPredicted RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 DFNA5O60443 496 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 IL1RNP18510 177 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 HALP42357 657 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 NR1H2P55055 460 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 IRF8Q02556 426 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 CHRNB3Q05901 458 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 HNRNPA1L2Q32P51 320 aaKnown RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 GRHL2Q6ISB3 625 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 THOC6Q86W42 341 aaKnown RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 RALGPS2Q86X27 583 aaPredicted RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 TMEM132CQ8N3T6 1108 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 CBR4Q8N4T8 237 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 DTWD1Q8N5C7 304 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 C12orf76Q8N812 135 aaPredicted RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 HM13Q8TCT9 377 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 PPP1R16AQ96I34 528 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 HHIPQ96QV1 700 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 THUMPD3Q9BV44 507 aaKnown RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 PHF7Q9BWX1 381 aaPredicted RBP16.36■□□□□ 0.21
GAPDH-201ENST00000229239 GPRC5BQ9NZH0 403 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 ZNF639Q9UID6 485 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 DOCK6Q96HP0 2047 aa16.36■□□□□ 0.21
GAPDH-201ENST00000229239 SAC3D1A6NKF1 404 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 H0YIV9 168 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 GSTA4O15217 222 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 H6PDO95479 791 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 AMD1P17707 334 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 PRPS1L1P21108 318 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 CTSCP53634 463 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 C21orf58P58505 322 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 TUBA4AP68366 448 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 SRSF11Q05519 484 aaKnown RBP16.35■□□□□ 0.21
GAPDH-201ENST00000229239 APOFQ13790 326 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 SELPLGQ14242 412 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 ELAVL3Q14576 367 aaKnown RBP16.35■□□□□ 0.21
GAPDH-201ENST00000229239 C12orf40Q86WS4 652 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 EPHX4Q8IUS5 362 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 RIMKLAQ8IXN7 391 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 ZNF548Q8NEK5 533 aaPredicted RBP16.35■□□□□ 0.21
GAPDH-201ENST00000229239 OR56A3Q8NH54 315 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 PYCR2Q96C36 320 aa16.35■□□□□ 0.21
GAPDH-201ENST00000229239 DGCR14Q96DF8 476 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms