RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 METTL25Q8N6Q8 603 aa13.23□□□□□ -0.29
RAB3D-201ENST00000222120 TSEN34Q9BSV6 310 aaKnown RBP13.23□□□□□ -0.29
RAB3D-201ENST00000222120 INPP5KQ9BT40 448 aa13.23□□□□□ -0.29
RAB3D-201ENST00000222120 NLNQ9BYT8 704 aa13.23□□□□□ -0.29
RAB3D-201ENST00000222120 CTPS2Q9NRF8 586 aa13.23□□□□□ -0.29
RAB3D-201ENST00000222120 ATAD3AQ9NVI7 634 aa13.23□□□□□ -0.29
RAB3D-201ENST00000222120 IFNA14P01570 189 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 NUDT6P53370 316 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 DGUOKQ16854 277 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 HMBOX1Q6NT76 420 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 PAGE2Q7Z2X7 111 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TCAIMQ8N3R3 496 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 FRS2Q8WU20 508 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 REPS1Q96D71 796 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 PKMYT1Q99640 499 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 ELAC1Q9H777 363 aaKnown RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TRNAU1APQ9NX07 287 aaKnown RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 OARD1Q9Y530 152 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TLL1O43897 1013 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 LEFTY1O75610 366 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 FGF18O76093 207 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 APOA1P02647 267 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 CYP2A13Q16696 494 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 RGS21Q2M5E4 152 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 RFX4Q33E94 735 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 AGTRAPQ6RW13 159 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 SMYD1Q8NB12 490 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 OR5K1Q8NHB7 308 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TFAP2CQ92754 450 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 LINC00597Q9H2U6 94 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 HMG20AQ9NP66 347 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 ARMC1Q9NVT9 282 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 HCFC1R1Q9NWW0 138 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 AHSPQ9NZD4 102 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 SGTAO43765 313 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 CHRM5P08912 532 aaPredicted RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 ALOX12P18054 663 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 SLC16A1P53985 500 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 MANFP55145 182 aaKnown RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 IHHQ14623 411 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TMC5Q6UXY8 1006 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 VTCN1Q7Z7D3 282 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 THOC6Q86W42 341 aaKnown RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 ZNF614Q8N883 585 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 PROX1Q92786 737 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 FZD4Q9ULV1 537 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 MYO10Q9HD67 2058 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 MAGEB3O15480 346 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TSPAN6O43657 245 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TPST2O60704 377 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 MITFO75030 526 aaPredicted RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 IL12AP29459 219 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 OR1E2P47887 323 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TOP3AQ13472 1001 aaPredicted RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 MED22Q15528 200 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 NOXRED1Q6NXP6 359 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 DEF8Q6ZN54 512 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 CCDC103Q8IW40 242 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 CXorf40AQ8TE69 158 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 TSPEARQ8WU66 669 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 APIPQ96GX9 242 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 BBS4Q96RK4 519 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 KLF16Q9BXK1 252 aaPredicted RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 AGPAT4Q9NRZ5 378 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 CLCA2Q9UQC9 943 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 RBMX2Q9Y388 322 aaKnown RBP13.22□□□□□ -0.29
RAB3D-201ENST00000222120 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
RAB3D-201ENST00000222120 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PENKP01210 267 aaPredicted RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 CDH3P22223 829 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 NTHL1P78549 312 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 AFMIDQ63HM1 303 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 TNFAIP8L2Q6P589 184 aaPredicted RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 CHERPQ8IWX8 916 aaKnown RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 CLECL1Q8IZS7 167 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 C11orf65Q8NCR3 313 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 BCL7CQ8WUZ0 217 aaPredicted RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 EXOSC8Q96B26 276 aaKnown RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 RHBDF1Q96CC6 855 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 C8orf4Q9NR00 106 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 IMP3Q9NV31 184 aaKnown RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 RUVBL1Q9Y265 456 aaKnown RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PCDHGA11Q9Y5H2 935 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 TRBV23OR9-2A0A075B6M9 112 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PCDH7O60245 1069 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PRPS1L1P21108 318 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PCSK6P29122 969 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 SLC5A2P31639 672 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 CTSKP43235 329 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 RUNX1T1Q06455 604 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms