RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HHATQ5VTY9 493 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 PRAMEF13Q5VWM6 474 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 THOC6Q86W42 341 aaKnown RBP26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 FAM20CQ8IXL6 584 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 TMEM237Q96Q45 408 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 ABCG4Q9H172 646 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 DMXL1Q9Y485 3027 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 WDR91A4D1P6 747 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 SLC30A4O14863 429 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 CAPN5O15484 640 aaPredicted RBP26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 OAS2P29728 719 aaKnown RBP26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 PRKAA2P54646 552 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 CFHR1Q03591 330 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 CCDC126Q96EE4 140 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 MOCOSQ96EN8 888 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 TGM7Q96PF1 710 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 MIPEPQ99797 713 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 OXSMQ9NWU1 459 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 OPTCQ9UBM4 332 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 KLHL3Q9UH77 587 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 PCDHB11Q9Y5F2 797 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 TNPO3Q9Y5L0 923 aaKnown RBP26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 ENTPD2Q9Y5L3 495 aa26.31■■□□□ 1.8
CHMP4B-201ENST00000217402 TM4SF5O14894 197 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 RFPL3O75679 317 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 DHRS4L1P0CG22 281 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 CCND1P24385 295 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 WDR4P57081 412 aaKnown RBP26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 SF1Q15637 639 aaKnown RBP26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 FAM92BQ6ZTR7 304 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 RPS27LQ71UM5 84 aaKnown RBP26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 TRIM73Q86UV7 250 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 SNX31Q8N9S9 440 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 SLC22A18Q96BI1 424 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 PPM1MQ96MI6 270 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 OR2A14Q96R47 310 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 OR4K3Q96R72 315 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 TWSG1Q9GZX9 223 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 TOR4AQ9NXH8 423 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 TMEM9Q9P0T7 183 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 POMT2Q9UKY4 750 aa26.3■■□□□ 1.8
CHMP4B-201ENST00000217402 SPAARA0A1B0GVQ0 90 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 MATN2O00339 956 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 PRICKLE3O43900 615 aaPredicted RBP26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 BPGMP07738 259 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 CSRP1P21291 193 aaKnown RBP26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 MPSTP25325 297 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 HERVK_113P63132 956 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 YBX1P67809 324 aaKnown RBP26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 PCBP2Q15366 365 aaKnown RBP eCLIP26.29■■□□□ 1.81e-6■■■□□ 16.4
CHMP4B-201ENST00000217402 SPESP1Q6UW49 350 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 LRRC70Q7Z2Q7 622 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 GLRX5Q86SX6 157 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 OR2A1Q8NGT9 310 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 FLVCR1-AS1Q8TAF5 88 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 FAM122AQ96E09 287 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 GFM1Q96RP9 751 aaKnown RBP26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 ERVK-6Q9BXR3 956 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 DNAJC11Q9NVH1 559 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 SH2B3Q9UQQ2 575 aa26.29■■□□□ 1.8
CHMP4B-201ENST00000217402 K7EPI3 171 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 CPNE6O95741 557 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 PRDX3P30048 256 aaKnown RBP26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 ZNF678Q5SXM1 525 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 LIPMQ5VYY2 423 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 TMPRSS9Q7Z410 1059 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 PLXDC1Q8IUK5 500 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 KLHDC8AQ8IYD2 350 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 TEX9Q8N6V9 391 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 CCNYL1Q8N7R7 359 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 NSUN5Q96P11 429 aaKnown RBP26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 PITPNM3Q9BZ71 974 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 ANGPTL3Q9Y5C1 460 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 E2F3O00716 465 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 RPS17P08708 135 aaKnown RBP26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 HOXB3P14651 431 aaPredicted RBP26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 NPPBP16860 134 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 IMPDH1P20839 514 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 PDK4Q16654 411 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 RSPO4Q2I0M5 234 aaPredicted RBP26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 SNAP47Q5SQN1 464 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 ICE2Q659A1 982 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 LCTLQ6UWM7 567 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 ALYREFQ86V81 257 aaKnown RBP26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 NUDCD3Q8IVD9 361 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 OR2L3Q8NG85 312 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 ZDHHC12Q96GR4 267 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 PCBD2Q9H0N5 130 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 PCTPQ9UKL6 214 aa26.28■■□□□ 1.8
CHMP4B-201ENST00000217402 GIPC1O14908 333 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 KIF1CO43896 1103 aaKnown RBP26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 SUPT7LO94864 414 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 CHN1P15882 459 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 ATP1A2P50993 1020 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 NOVA1P51513 510 aaKnown RBP26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 NAGLUP54802 743 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 ILKQ13418 452 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 SPIDRQ14159 915 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 WDR74Q6RFH5 385 aaPredicted RBP26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 ZCCHC23Q6ZST2 131 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms