RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ARG2P78540 354 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 MEF2AQ02078 507 aaPredicted RBP13.41□□□□□ -0.26
SIX4-201ENST00000216513 INAQ16352 499 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 HKDC1Q2TB90 917 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 FAM72AQ5TYM5 149 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 FAM72DQ6L9T8 149 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 FAM72BQ86X60 149 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 HPS6Q86YV9 775 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 CLIP4Q8N3C7 705 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 OR9A1PQ8NGU1 263 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 RAP2CQ9Y3L5 183 aa13.41□□□□□ -0.26
SIX4-201ENST00000216513 SDK1Q7Z5N4 2213 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ITGB4P16144 1822 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 LATS1O95835 1130 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 CDH1P12830 882 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 IL7RP16871 459 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 DUSP6Q16828 381 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 HIPK1Q86Z02 1210 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 TWIST2Q8WVJ9 160 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 KBTBD7Q8WVZ9 684 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ZNF358Q9NW07 568 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 H7BY64 318 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 UGT2B17O75795 530 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 SLC7A2P52569 658 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 TFF2Q03403 129 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 TOP3AQ13472 1001 aaPredicted RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 GFOD2Q3B7J2 385 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 IL23RQ5VWK5 629 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 RMND5BQ96G75 393 aaPredicted RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 SLC35G5Q96KT7 338 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 PRAP1Q96NZ9 151 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 XYLT2Q9H1B5 865 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ACSS3Q9H6R3 686 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 CORO1CQ9ULV4 474 aaPredicted RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 PROS1P07225 676 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 RTL10Q7L3V2 364 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 AMIGO1Q86WK6 493 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 FSTL5Q8N475 847 aaPredicted RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 TRAM1L1Q8N609 369 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ZNF527Q8NB42 609 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 BATF3Q9NR55 127 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 PCDH7O60245 1069 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ALOX5P09917 674 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 GSTM5P46439 218 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 PTDSS1P48651 473 aaKnown RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 UGT2B15P54855 530 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 TRPS1Q9UHF7 1281 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 SCDO00767 359 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 MAP2K7O14733 419 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 IDO1P14902 403 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ZNF267Q14586 743 aaPredicted RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 RFX4Q33E94 735 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 TSSK4Q6SA08 328 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 NEK10Q6ZWH5 1172 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 PIWIL2Q8TC59 973 aaKnown RBP13.4□□□□□ -0.26
SIX4-201ENST00000216513 EPB41L1Q9H4G0 881 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 CFL2Q9Y281 166 aa13.4□□□□□ -0.26
SIX4-201ENST00000216513 ZNF726A6NNF4 738 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 FCGR1AP12314 374 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ITGA2P17301 1181 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 PFKLP17858 780 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 FOLR3P41439 243 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 SMIM11AP58511 58 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 RPL26P61254 145 aaKnown RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 KIAA0895LQ68EN5 471 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 C12orf40Q86WS4 652 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 CLEC1AQ8NC01 280 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 BDH2Q9BUT1 245 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 RPL26L1Q9UNX3 145 aaKnown RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 SYNGR4O95473 234 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ITGADQ13349 1161 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 GPR68Q15743 365 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 RFTN2Q52LD8 501 aaPredicted RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 TEX47Q8TBZ9 253 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 CMTM7Q96FZ5 175 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 FAM86C2PA6NEL3 165 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ALOX15BO15296 676 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 SNX3O60493 162 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 GDI2P50395 445 aaKnown RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 PTPN5P54829 565 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 KIAA0930Q6ICG6 404 aaPredicted RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 FSTL4Q6MZW2 842 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 KIAA0408Q6ZU52 694 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms