RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 FBXO8Q9NRD0 319 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 AASDHPPTQ9NRN7 309 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 CAB39Q9Y376 341 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 PLXNA4Q9HCM2 1894 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 EFCAB9A8MZ26 197 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 WBP4O75554 376 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 CLDN7O95471 211 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 DBTP11182 482 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 RPL17P18621 184 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 PSMA3P25788 255 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 CTGFP29279 349 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 AQP1P29972 269 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 ATP5C1P36542 298 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 TGFBR2P37173 567 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 CASP9P55211 416 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 TAF1CQ15572 869 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 KDM4DQ6B0I6 523 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 PDE12Q6L8Q7 609 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 PRSS55Q6UWB4 352 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 SNX20Q7Z614 316 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 TMEM132CQ8N3T6 1108 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 GLB1L3Q8NCI6 653 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 DNASE1L2Q92874 299 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 TPD52L3Q96J77 140 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 APOLD1Q96LR9 279 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 MAGIXQ9H6Y5 334 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 RFXANKO14593 260 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ADAM12O43184 909 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ZNF7P17097 686 aaPredicted RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 JUNDP17535 347 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ATF6P18850 670 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 CD9P21926 228 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 MAGEA11P43364 429 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 SERPINB10P48595 397 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 SLC11A2P49281 568 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 RPP38P78345 283 aaKnown RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 MAD2L1Q13257 205 aaPredicted RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 KCNA10Q16322 511 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 SETD9Q8NE22 299 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 LINC01599Q8WXQ3 324 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 KCNC2Q96PR1 638 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 DCSTAMPQ9H295 470 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 KRT84Q9NSB2 600 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 SLC38A8A6NNN8 435 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ERN1O75460 977 aaKnown RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 STK16O75716 305 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 NUDT7P0C024 238 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 COL6A1P12109 1028 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 SDC1P18827 310 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 CLK1P49759 484 aaKnown RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 RGS4P49798 205 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 NUDT6P53370 316 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 RHOAP61586 193 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 RFX4Q33E94 735 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ZC3H12BQ5HYM0 836 aaKnown RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 RTP2Q5QGT7 225 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 ARMC12Q5T9G4 340 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 CAPN13Q6MZZ7 669 aaPredicted RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 CARNMT1Q8N4J0 409 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 RHOXF1Q8NHV9 184 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 SKA2Q8WVK7 121 aaPredicted RBP13.65□□□□□ -0.22
USH1C-201ENST00000005226 IL1RAPQ9NPH3 570 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 DNMT3LQ9UJW3 386 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 LAMA3Q16787 3333 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 PLXNA3P51805 1871 aa13.65□□□□□ -0.22
USH1C-201ENST00000005226 PIKFYVEQ9Y2I7 2098 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 SCN10AQ9Y5Y9 1956 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 DNTTP04053 509 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 ENGP17813 658 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 GRK5P34947 590 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 CLDN8P56748 225 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 IL18R1Q13478 541 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.23
USH1C-201ENST00000005226 CHRNA6Q15825 494 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 HORMAD1Q86X24 394 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 CLECL1Q8IZS7 167 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 STK40Q8N2I9 435 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 ZBTB2Q8N680 514 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 PHF10Q8WUB8 498 aaKnown RBP13.64□□□□□ -0.23
USH1C-201ENST00000005226 APH1BQ8WW43 257 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 THG1LQ9NWX6 298 aaKnown RBP13.64□□□□□ -0.23
USH1C-201ENST00000005226 ANKMY1Q9P2S6 941 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 LHX3Q9UBR4 397 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 MBD1Q9UIS9 605 aaPredicted RBP13.64□□□□□ -0.23
USH1C-201ENST00000005226 VWA8A3KMH1 1905 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 ILVBLA1L0T0 632 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 H7C0S8 307 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 M0R129 80 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms