RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm35911A0A1D5RLS7 214 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Socs2O35717 198 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gdi1P50396 447 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Emx2Q04744 253 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 StimateQ3UF25 288 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Usp30Q3UN04 517 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 AbrQ5SSL4 859 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cpsf6Q6NVF9 551 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ppp2r1bQ7TNP2 601 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tas2r38Q7TQA6 331 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Fbxl21Q8BFZ4 434 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 DglucyQ8BH86 617 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 TtpaQ8BWP5 278 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 C1rbQ8CFG9 706 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Crlf2Q8CII9 359 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 4921530L21RikQ9CQ47 274 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rpl38Q9JJI8 70 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Upk3aQ9JKX8 287 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 PrepQ9QUR6 710 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Zbp1Q9QY24 411 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Aqp5Q9WTY4 265 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Znf711A2ANX9 761 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cped1B2RX70 1026 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Hoxb9P20615 250 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ntsr2P70310 416 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Anxa4P97429 319 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 AnpepP97449 966 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sec24aQ3U2P1 1090 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Defb48Q3UW22 87 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm11492Q5ND19 536 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc10a7Q5PT53 340 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rbl1Q64701 1063 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Larp4bQ6A0A2 741 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc39a10Q6P5F6 833 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rhox11Q810N8 206 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cept1Q8BGS7 416 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 IlkapQ8R0F6 392 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc29a4Q8R139 528 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Batf2Q8R1H8 277 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 AcmsdQ8R519 336 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr806Q8VFI2 313 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Fam3cQ91VU0 227 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gjd3Q91YD1 278 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Creb3l4Q9D2A5 370 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Katna1Q9WV86 491 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rad9aQ9Z0F6 389 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ajm1A2AJA9 974 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 RngttO55236 597 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Prdx1P35700 199 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 PapolgQ6PCL9 739 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Actr5Q80US4 605 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Q810N5 247 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mterf1aQ8CHZ9 379 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Dennd2dQ91VV4 469 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Prdm9Q96EQ9 843 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Kif19Q99PT9 997 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 PpidQ9CR16 370 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 EbplQ9D0P0 206 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tas2r119Q9JKT2 335 aa15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 VapaQ9WV55 249 aaKnown RBP15.45■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tet2Q4JK59 1912 aaKnown RBP15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 AccsA2AIG8 502 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Itga8A2ARA8 1062 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Kpna4O35343 521 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sh3pxd2aO89032 1124 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 TecP24604 630 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 LynP25911 512 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 SirpaP97797 513 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr381Q5SSP0 311 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Znf366Q6NS86 746 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Trnt1Q8K1J6 434 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Elp2Q91WG4 831 aaKnown RBP15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ackr4Q924I3 350 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cldnd1Q9CQX5 253 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Hmgn3Q9DCB1 99 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 ArntlQ9WTL8 632 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm29776A0A286YEC0 699 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Lzts3A2AHG0 700 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 A6H6Q4 206 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Matn4O89029 624 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Phxr1P15973 60 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 CratP47934 626 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Nrg2P56974 756 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 PtpaP58389 323 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sorbs2Q3UTJ2 1180 aaKnown RBP15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gpr165Q3V3A3 455 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Eri2Q5BKS4 688 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mvb12aQ78HU3 271 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 MtdhQ80WJ7 579 aaKnown RBP15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ppp1r1cQ8BKK4 108 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Creb5Q8K1L0 357 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Atp6v1b1Q91YH6 513 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 NgrnQ99KS2 293 aaKnown RBP15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 PtsQ9R1Z7 144 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm9573F7C950 1606 aa15.44■□□□□ 0.06
Trim39-203ENSMUST00000113706 Elovl3O35949 271 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Clec2lP0C7M9 211 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Msr1P30204 458 aaKnown RBP15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Aqp1Q02013 269 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 MarcoQ60754 518 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms