RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Nipsnap3aB1AWZ3 247 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Itga9B8JK39 1036 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zfp988F6VKC7 633 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Plscr5J3QM92 274 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Vmn1r20K7N778 303 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm3187M0QWW3 260 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Angpt1O08538 498 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cd3dP04235 173 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SrcP05480 541 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 CatspereP0DP43 985 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Zfp987Q32P14 633 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 DhhQ61488 396 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Bend3Q6PAL0 825 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 GfralQ6SJE0 393 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 SugctQ7TNE1 436 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ccdc50Q810U5 305 aaKnown RBP8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Trmt12Q8BG71 446 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cggbp1Q8BHG9 167 aaKnown RBP8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ap5m1Q8BJ63 490 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Prss35Q8C0F9 409 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Fam110bQ8C739 366 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Agpat4Q8K4X7 378 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Trpm8Q8R4D5 1104 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfr1093Q8VF14 322 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Olfr1043Q8VFK4 314 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Oasl1Q8VI94 511 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Pcdhb12Q91Y07 789 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 D6Wsu163eQ91YN0 552 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Hrh4Q91ZY2 391 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tas1r1Q99PG6 842 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rexo2Q9D8S4 237 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Adarb2Q9JI20 745 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Trim10Q9WUH5 489 aa8.85□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Scn9aQ62205 1984 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Greb1lB9EJV3 1913 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm43796A0A0J9YV32 372 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Opn1mwO35599 359 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Slc32a1O35633 525 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tnnc1P19123 161 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 AcheP21836 614 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ptpn12P35831 775 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Acsl1P41216 699 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 PgfP49764 158 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rpl10aP53026 217 aaKnown RBP8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rps17P63276 135 aaKnown RBP8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Brms1lQ3U1T3 323 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Gm45902Q3UDN3 361 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Prrc1Q3UPH1 443 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tbc1d24Q3UUG6 561 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 C2cd4cC2CD4Q5HZI2 419 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Itih1Q61702 907 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Spock1Q62288 442 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Pde1cQ64338 706 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ptpmt1Q66GT5 193 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Megf10Q6DIB5 1147 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Sat2Q6P8J2 170 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Papd7Q6PB75 542 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Paqr9Q6TCG2 375 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tas2r136Q7TQA8 305 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 C2cd2lQ80X80 706 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 GskipQ8BGR8 139 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Csgalnact1Q8BJQ9 530 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 LsampQ8BLK3 341 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Lig4Q8BTF7 911 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Osbpl6Q8BXR9 959 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Epc2Q8C0I4 808 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tmem145Q8C4U2 746 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Piwil2Q8CDG1 971 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mtmr4Q91XS1 1190 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Tubgcp2Q921G8 905 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ist1Q9CX00 362 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Snu13Q9D0T1 128 aaKnown RBP8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Necab3Q9D6J4 353 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Borcs5Q9D920 195 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Spcs1Q9D958 161 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Usp12Q9D9M2 370 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Mmp1aQ9EPL5 464 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Rcan2Q9JHG2 197 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ppp1r3fQ9JIG4 799 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Cdh13Q9WTR5 714 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Btaf1E9QAE3 1848 aa8.84□□□□□ -0.99
Upf3b-201ENSMUST00000076265 Ceacam15A0A0B4J1L0 234 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 FcmrA1KXC4 422 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Frmd7A2AD83 703 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr1049A2ARZ0 308 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 ZxdbA2CE44 873 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmem238A9JSM3 176 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Fbxw24E9PXM9 466 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Pwwp2bE9Q9M8 600 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm11397F6V5V4 377 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Eef2kO08796 724 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 NoctO35710 429 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 LatO54957 242 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Hipk1O88904 1210 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 TxnP10639 105 aaKnown RBP8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Ca6P18761 317 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Entpd1P55772 510 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Btbd35f14Q1LZI5 498 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Rars2Q3U186 578 aa8.83□□□□□ -1
Upf3b-201ENSMUST00000076265 Pak6Q3ULB5 682 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms