RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Fam71bQ5STT6 665 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Laptm4aQ60961 233 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Il18r1Q61098 537 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Sec24dQ6NXL1 1032 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ddx51Q6P9R1 639 aaKnown RBP12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Trpv1Q704Y3 839 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Syt14Q7TN84 555 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ppp2r1bQ7TNP2 601 aaKnown RBP12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 B3gnt5Q8BGY6 376 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Yipf4Q8C407 246 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr1310Q8VF85 312 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr691Q8VGW5 322 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rab14Q91V41 215 aaKnown RBP12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Golga7Q91W53 137 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 AdprmQ99KS6 340 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lsm7Q9CQQ8 103 aaKnown RBP12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Nkiras2Q9CR56 191 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rpl3lE9PWZ3 407 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Zfr2E9Q5M4 874 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Sult3a2G5E904 293 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm20828J3KMI7 228 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dnmt3cP0DOY1 709 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Zfp14P10755 501 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Hbq1bQ3U0A6 142 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Apex2Q68G58 516 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kmt5cQ6Q783 468 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Paqr3Q6TCG8 311 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Slc36a1Q8K4D3 475 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lrrc49Q91YK0 686 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fam45aQ9D8N2 357 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 1700034I23RikQ9D9Q3 184 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Slc19a2Q9EQN9 498 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Znhit2Q9QY66 399 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fbxo17Q9QZM8 286 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vmn2r118E9Q1C1 853 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm3696K7N751 203 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Npc1O35604 1277 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Alg10bQ3UGP8 474 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mylk4Q5SUV5 386 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ccdc17Q8CE13 565 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 KptnQ8VCX6 430 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Coro6Q920M5 471 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rpl4Q9D8E6 419 aaKnown RBP12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Bpifa3Q9D9J8 232 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cog8Q9JJA2 640 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Atp6ap1Q9R1Q9 463 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Creb3l1Q9Z125 519 aa12.47□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ect2lA0A140LIP2 953 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Alox8O35936 677 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Coro1aO89053 461 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Guca1aP43081 202 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tm9sf2P58021 662 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rad51Q08297 339 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pyroxd2Q3U4I7 581 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dnajc11Q5U458 559 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gpr17Q6NS65 339 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dusp11Q6NXK5 321 aaKnown RBP12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cd300lfQ6SJQ7 337 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kctd13Q8BGV7 329 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fam129bQ8R1F1 749 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 ClmpQ8R373 373 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr1019Q8VGS3 310 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr606Q8VGZ8 319 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Aim2Q91VJ1 354 aaKnown RBP12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Trappc5Q9CQA1 188 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Atp6ap2Q9CYN9 350 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cmtm7Q9ESD6 167 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Upk1bQ9Z2C6 260 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Megf6Q80V70 1572 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fam124aD3Z5V4 536 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fv4P11370 679 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ctla2aP12399 137 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Hoxa2P31245 372 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rin3P59729 980 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Hpcal1P62748 193 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Hdac2P70288 488 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vps72Q62481 368 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Atp11bQ6DFW5 1175 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pcp4l1Q6W8Q3 68 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Commd7Q8BG94 200 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Stk-ps2Q8C0V7 499 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ablim1Q8K4G5 861 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Sbk1Q8QZX0 417 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Nudt4Q8R2U6 179 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ints14Q8R3P6 515 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr1346Q8VGH6 313 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ankra2Q99PE2 312 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 CutalQ9D1U5 156 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 TheglQ9DA15 459 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Prkar1aQ9DBC7 381 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Sacm1lQ9EP69 587 aa12.46□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mfsd13bA0A1L1SUA2 455 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm5724L7N264 670 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 CaskO70589 926 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cntn5P68500 1098 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 LchnQ3UHG7 455 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tmem130Q6NXM3 419 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tmc6Q7TN60 810 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Olfr1152Q7TR34 310 aa12.46□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Prap1Q80XD8 149 aa12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms