RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SLC6A12P48065 614 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 CSRP2Q16527 193 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-230ENST00000641927 PRR23CQ6ZRP0 262 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 LRRC70Q7Z2Q7 622 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 C17orf82Q86X59 251 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-230ENST00000641927 LINC01555Q8NAE3 123 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 OR2L8Q8NGY9 312 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 OR56A3Q8NH54 315 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 OR10G6Q8NH81 332 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 APOLD1Q96LR9 279 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 TBC1D10AQ9BXI6 508 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-230ENST00000641927 DNAAF2Q9NVR5 837 aaKnown RBP16.92■□□□□ 0.3
PHGDH-230ENST00000641927 PCTPQ9UKL6 214 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 RNF215Q9Y6U7 377 aa16.92■□□□□ 0.3
PHGDH-230ENST00000641927 RPS17P08708 135 aaKnown RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 ZNF883P0CG24 379 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 ERGP11308 486 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 EPB42P16452 691 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 BST1Q10588 318 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 GTF2H2Q13888 395 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 NR0B2Q15466 257 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 RBBP7Q16576 425 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 AASDHQ4L235 1098 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 GTF2H2CQ6P1K8 395 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 GOLGA7Q7Z5G4 137 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 THOC6Q86W42 341 aaKnown RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 RAB3IL1Q8TBN0 382 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 TRPC4APQ8TEL6 797 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 SETD7Q8WTS6 366 aaKnown RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 SMPDL3AQ92484 453 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 ATP6V1E2Q96A05 226 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 ACAT2Q9BWD1 397 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 CAPS2Q9BXY5 557 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 RXFP3Q9NSD7 469 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 DNAJC11Q9NVH1 559 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 INTS7Q9NVH2 962 aaKnown RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 OR6C2Q9NZP2 312 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 PADI4Q9UM07 663 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 OR6C74A6NCV1 312 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 HSPA4LO95757 839 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 GLB1P16278 677 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 TYRP1P17643 537 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 CCND1P24385 295 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 ALDH4A1P30038 563 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 CCR10P46092 362 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 SLC1A6P48664 564 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 CLCQ05315 142 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 RCN2Q14257 317 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 INAVAQ3KP66 663 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 CES4AQ5XG92 561 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 FRMD7Q6ZUT3 714 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 LRRC56Q8IYG6 542 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 ZNF483Q8TF39 744 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-230ENST00000641927 CNDP1Q96KN2 507 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 C1QTNF3Q9BXJ4 246 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 PITPNM3Q9BZ71 974 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 SHCBP1LQ9BZQ2 653 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 GSTO2Q9H4Y5 243 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 PARD6AQ9NPB6 346 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 TMEM9BQ9NQ34 198 aa16.91■□□□□ 0.3
PHGDH-230ENST00000641927 MUC6Q6W4X9 2439 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 CPED1A4D0V7 1026 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 ISM1B1AKI9 464 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 TMEM114B3SHH9 223 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 TCP11X1B4DZS4 312 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 CDX4O14627 284 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 NUDT21O43809 227 aaKnown RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 NPHS1O60500 1241 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 LRP3O75074 770 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 LYPLA1O75608 230 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 AMD1P17707 334 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 GRK6P43250 576 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 PIK3CGP48736 1102 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 ABCE1P61221 599 aaKnown RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 GNGT1P63211 74 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 PRAMEF13Q5VWM6 474 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 METTL2BQ6P1Q9 378 aaKnown RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 SGPP1Q9BX95 441 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 DRC3Q9H069 523 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 NOL11Q9H8H0 719 aaKnown RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 ZNF395Q9H8N7 513 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-230ENST00000641927 IPPKQ9H8X2 491 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 KCNK4Q9NYG8 393 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 TAC3Q9UHF0 121 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 BTBD3Q9Y2F9 522 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 DYRK1BQ9Y463 629 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 PCDHGB2Q9Y5G2 931 aa16.9■□□□□ 0.3
PHGDH-230ENST00000641927 PIPSLA2A3N6 862 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 GSAPA4D1B5 854 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 BTN3A3O00478 584 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 KLF11O14901 512 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 ITM2AO43736 263 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 KATNA1O75449 491 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 UBXN7O94888 489 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 CHRNGP07510 517 aa16.89■□□□□ 0.29
PHGDH-230ENST00000641927 CHRM5P08912 532 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-230ENST00000641927 POLR2CP19387 275 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-230ENST00000641927 PSMB5P28074 263 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms