RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ZNF423Q2M1K9 1284 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 KIF19Q2TAC6 998 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 PTCHD3Q3KNS1 767 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 UGT3A2Q3SY77 523 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 CCSMST1Q4G0I0 132 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TCHHL1Q5QJ38 904 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 GPR153Q6NV75 609 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TMEM154Q6P9G4 183 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 IL27RAQ6UWB1 636 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 ENPP7Q6UWV6 458 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SYT13Q7L8C5 426 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 RD3Q7Z3Z2 195 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TRIM69Q86WT6 500 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 DSELQ8IZU8 1212 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 PQLC1Q8N2U9 271 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SYNPOQ8N3V7 929 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SNX19Q92543 992 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 ROPN1LQ96C74 230 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SPDL1Q96EA4 605 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 C3orf30Q96M34 536 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 PKP4Q99569 1192 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SLC25A23Q9BV35 468 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TPSD1Q9BZJ3 242 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 DPEP2Q9H4A9 486 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 EPB41L1Q9H4G0 881 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 Q9H521 79 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 AKTIPQ9H8T0 292 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 RMI1Q9H9A7 625 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 LTB4R2Q9NPC1 389 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 ITM2CQ9NQX7 267 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TM7SF3Q9NS93 570 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 DNAJC11Q9NVH1 559 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 RIC8BQ9NVN3 520 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 KLQ9UEF7 1012 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 GIMAP2Q9UG22 337 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SLC23A2Q9UGH3 650 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 EBF1Q9UH73 591 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 KCNK6Q9Y257 313 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SLC22A14Q9Y267 594 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 ASF1AQ9Y294 204 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TDRKHQ9Y2W6 561 aaKnown RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 RNF11Q9Y3C5 154 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 DNAJC15Q9Y5T4 150 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 THADAQ6YHU6 1953 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 PLXND1Q9Y4D7 1925 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 CROCCQ5TZA2 2017 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 LOC100653049A0A140TA62 436 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 PRSS51A0A1B0GVH4 220 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 KRBA1A5PL33 1030 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 DPPA5A6NC42 116 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 POM121BA6NF01 834 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 PDZK1P1A8MUH7 402 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 CHURC1-FNTBB4DL54 471 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 TRIM38O00635 465 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 LATO43561 262 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 DENRO43583 198 aaKnown RBP8.6□□□□□ -1.03
PHGDH-219ENST00000641513 AHCYL1O43865 530 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 NDUFS2O75306 463 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 KRT34O76011 436 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 CLDN9O95484 217 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 C1orf105O95561 183 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 RPN2P04844 631 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 CEACAM5P06731 702 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 FESP07332 822 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 C8BP07358 591 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 LYNP07948 512 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 LINGO3P0C6S8 592 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 EBLN1P0CF75 366 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 LBPP18428 481 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 KELP23276 732 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 RPL10P27635 214 aaKnown RBP8.6□□□□□ -1.03
PHGDH-219ENST00000641513 HTR1BP28222 390 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 OXTRP30559 389 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 GGT5P36269 586 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 CLCNKAP51800 687 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 THOP1P52888 689 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 ZP2Q05996 745 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 TRAF3Q13114 568 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 RPA4Q13156 261 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 GRB7Q14451 532 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 KRT33BQ14525 404 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 RPS6KA2Q15349 733 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 TCEA2Q15560 299 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 CPSF6Q16630 551 aaKnown RBP eCLIP8.6□□□□□ -1.03
PHGDH-219ENST00000641513 IMPG1Q17R60 797 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 THEMIS2Q5TEJ8 643 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 METTL2BQ6P1Q9 378 aaKnown RBP8.6□□□□□ -1.03
PHGDH-219ENST00000641513 C8orf82Q6P1X6 216 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-219ENST00000641513 PRMT9Q6P2P2 845 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 AGTRAPQ6RW13 159 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 UNC5DQ6UXZ4 953 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 C11orf96Q7Z7L8 435 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 PDZD3Q86UT5 571 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 THOC6Q86W42 341 aaKnown RBP8.6□□□□□ -1.03
PHGDH-219ENST00000641513 TICAM1Q8IUC6 712 aa8.6□□□□□ -1.03
PHGDH-219ENST00000641513 SYTL1Q8IYJ3 562 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms