RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 SLX1AQ9BQ83 275 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 SEMA3GQ9NS98 782 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 INTS7Q9NVH2 962 aaKnown RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 SUCOQ9UBS9 1254 aaKnown RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 FEZ2Q9UHY8 353 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 NXT1Q9UKK6 140 aaKnown RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 SLC5A10A0PJK1 596 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 DYTNA2CJ06 578 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 PJA2O43164 708 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 ALBP02768 609 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 EIF2S1P05198 315 aaKnown RBP14.37□□□□□ -0.11
SYNE2-228ENST00000639659 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
SYNE2-228ENST00000639659 ACPPP15309 386 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 MAGEA1P43355 309 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 HSPA14Q0VDF9 509 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 SF1Q15637 639 aaKnown RBP14.37□□□□□ -0.11
SYNE2-228ENST00000639659 CCDC38Q502W7 563 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 ZC3H12BQ5HYM0 836 aaKnown RBP14.37□□□□□ -0.11
SYNE2-228ENST00000639659 MYO7BQ6PIF6 2116 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 FIGLAQ6QHK4 219 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 GDF7Q7Z4P5 450 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 SIRT6Q8N6T7 355 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 LINC01555Q8NAE3 123 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 STYXQ8WUJ0 223 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 NACC2Q96BF6 587 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 PPP1R2P1Q96PQ5 205 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 YIPF2Q9BWQ6 316 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.37□□□□□ -0.11
SYNE2-228ENST00000639659 STOX2Q9P2F5 926 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-228ENST00000639659 INTUQ9ULD6 942 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 SLC39A10Q9ULF5 831 aa14.37□□□□□ -0.11
SYNE2-228ENST00000639659 H7C0S8 307 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 OR1I1O60431 355 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 HPP00738 406 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 OCA2Q04671 838 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 EEF1A2Q05639 463 aaKnown RBP14.36□□□□□ -0.11
SYNE2-228ENST00000639659 KLC1Q07866 573 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 ITIH4Q14624 930 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 FCRL6Q6DN72 434 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 FAAH2Q6GMR7 532 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 BRIX1Q8TDN6 353 aaKnown RBP14.36□□□□□ -0.11
SYNE2-228ENST00000639659 SLC22A18Q96BI1 424 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 MIEF2Q96C03 454 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 OSBPL8Q9BZF1 889 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 C3orf18Q9UK00 162 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 FAM169AQ9Y6X4 670 aa14.36□□□□□ -0.11
SYNE2-228ENST00000639659 NSG1A0A0A6YYJ2 146 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 A0A0J9YVX5 310 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 HEATR9A2RTY3 570 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 CCDC162PA2VCL2 907 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 CCL21O00585 134 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 FFAR3O14843 346 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 GPR42O15529 346 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 UNC5CO95185 931 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 RPN2P04844 631 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 COX6B1P14854 86 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 CD9P21926 228 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 PSMB5P28074 263 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 GCGRP47871 477 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 NAP1L1P55209 391 aaKnown RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 PLOD1Q02809 727 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 TCEAL1Q15170 157 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 DNAJC21Q5F1R6 531 aaKnown RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 TCTE1Q5JU00 501 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 C11orf63Q6NUN7 778 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 CNSTQ6PJW8 725 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 PACS1Q6VY07 963 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 MRGPRGQ86SM5 289 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 VRK3Q8IV63 474 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 DCUN1D3Q8IWE4 304 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 KBTBD2Q8IY47 623 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 STT3BQ8TCJ2 826 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 LKAAEAR1Q8TD35 194 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 SKA2Q8WVK7 121 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 ITLN2Q8WWU7 325 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 NR4A3Q92570 626 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 CCDC120Q96HB5 630 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 TAAR6Q96RI8 345 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 SLC26A1Q9H2B4 701 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 ARNT2Q9HBZ2 717 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 ZNF304Q9HCX3 659 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 ZC3H7BQ9UGR2 993 aaKnown RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
SYNE2-228ENST00000639659 FBN2P35556 2912 aa14.35□□□□□ -0.11
SYNE2-228ENST00000639659 HYKKA2RU49 373 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 IQCF5A8MTL0 148 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 PCDH17O14917 1159 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 USP1O94782 785 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 S1PR4O95977 384 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 FBLP22087 321 aaKnown RBP14.34□□□□□ -0.11
SYNE2-228ENST00000639659 HTR1EP28566 365 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 FOXN2P32314 431 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 CARSP49589 748 aaKnown RBP14.34□□□□□ -0.11
SYNE2-228ENST00000639659 TDGF1P3P51864 188 aa14.34□□□□□ -0.11
SYNE2-228ENST00000639659 COPS2P61201 443 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms