RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 AAR2Q9Y312 384 aaKnown RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 PRELID3BQ9Y3B1 194 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 KIAA1217Q5T5P2 1943 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 LOC100506127A0A0U1RQW1 187 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 WASH4PA8MWX3 477 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 PRKACGP22612 351 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 SLC1A2P43004 574 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 KIR2DL3P43628 341 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 DIO3P55073 304 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 PWP1Q13610 501 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 EIF4HQ15056 248 aaKnown RBP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 SMN1Q16637 294 aaKnown RBP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 TATDN3Q17R31 274 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF367Q7RTV3 350 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 TLK2Q86UE8 772 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 GHDCQ8N2G8 530 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 TTC29Q8NA56 475 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 OR2T12Q8NG77 320 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 C9orf43Q8TAL5 461 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 FBXO30Q8TB52 745 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 APH1BQ8WW43 257 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 SMG7Q92540 1137 aaKnown RBP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 AKAP1Q92667 903 aaKnown RBP eCLIP11.73□□□□□ -0.53
CAPN3-221ENST00000638141 COQ8BQ96D53 544 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 PHF21BQ96EK2 531 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 KLHL15Q96M94 604 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 ZSWIM3Q96MP5 696 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 PRRG3Q9BZD7 231 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 RIBC2Q9H4K1 309 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 SYNDIG1Q9H7V2 258 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 COQ3Q9NZJ6 369 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
CAPN3-221ENST00000638141 IGKV6D-21A0A0A0MT36 114 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 IQCMA0A1B0GVH7 501 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF98A6NK75 572 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MYL12BO14950 172 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 YKT6O15498 198 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 RGS5O15539 181 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MITFO75030 526 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 RECQL5O94762 991 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 RAF1P04049 648 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MYL12AP19105 171 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 BRCC3P46736 316 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 PSPHP78330 225 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 PRKG2Q13237 762 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 LAPTM5Q13571 262 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 SLC25A52Q3SY17 297 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TRIM60Q495X7 471 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 XKR7Q5GH72 579 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 LRRC66Q68CR7 880 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 PLET1Q6UQ28 207 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TFAP2EQ6VUC0 442 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 BNIPLQ7Z465 357 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 GPR149Q86SP6 731 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 FAM124AQ86V42 546 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 DENND6AQ8IWF6 608 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 ZBTB44Q8NCP5 570 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 AGBL3Q8NEM8 1001 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 ENKURQ8TC29 256 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 AHCYL2Q96HN2 611 aaKnown RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 HPDLQ96IR7 371 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TEX37Q96LM6 180 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TSGA13Q96PP4 275 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TMEM209Q96SK2 561 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 SLC9A7Q96T83 725 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 DCAF13Q9NV06 445 aaKnown RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 GIMAP2Q9UG22 337 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TNPO3Q9Y5L0 923 aaKnown RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 ALG5Q9Y673 324 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MYLKQ15746 1914 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 A8MUA0 341 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 PPP6CO00743 305 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 KHNYNO15037 678 aaKnown RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 NPR3P17342 541 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 NFKB1P19838 968 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 RAB3AP20336 220 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 KELP23276 732 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MATKP42679 507 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 DAPP51397 102 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 PLK1P53350 603 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 SIM2Q14190 667 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-221ENST00000638141 ATF7IP2Q5U623 682 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 CACHD1Q5VU97 1274 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 GDPGP1Q6ZNW5 385 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 SNX20Q7Z614 316 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 TRIM48Q8IWZ4 208 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 SCUBE3Q8IX30 993 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 ST8SIA4Q92187 359 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 CHCHD6Q9BRQ6 235 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 MID1IP1Q9NPA3 183 aa11.72□□□□□ -0.53
CAPN3-221ENST00000638141 CUEDC1Q9NWM3 386 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms