RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CNBD2Q96M20 576 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 FAM129BQ96TA1 746 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 OSBPL11Q9BXB4 747 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 TMEM245Q9H330 911 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 PIF1Q9H611 641 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 ANAPC2Q9UJX6 822 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 RECQL5O94762 991 aaPredicted RBP19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 CKMT2P17540 419 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 MAPK1P28482 360 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 IRF8Q02556 426 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 ZNF234Q14588 700 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 ZNF658BQ4V348 819 aaPredicted RBP19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 INTS11Q5TA45 600 aaKnown RBP19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 GLYATQ6IB77 296 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 AGTRAPQ6RW13 159 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 CLHC1Q8NHS4 586 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 BIRC7Q96CA5 298 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 CENPNQ96H22 339 aaPredicted RBP19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 OR52E6Q96RD3 313 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 PBX4Q9BYU1 374 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 OBP2AQ9NY56 170 aa19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 STOX2Q9P2F5 926 aaPredicted RBP19.16■□□□□ 0.66
PCDHB11-202ENST00000624887 ADRB3P13945 408 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 SOX11P35716 441 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 BCL7AQ4VC05 210 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 AADATQ8N5Z0 425 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 PACRGLQ8N7B6 248 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 DNAJB8Q8NHS0 232 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 NUS1Q96E22 293 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 PPP1R16AQ96I34 528 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 ZNF583Q96ND8 569 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 ZCCHC2Q9C0B9 1178 aaKnown RBP19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 FAM192AQ9GZU8 254 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 HPS4Q9NQG7 708 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 PCDHGB4Q9UN71 923 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 PCDHGB5Q9Y5G0 923 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 SOCS2O14508 198 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 TPST1O60507 370 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 AMD1P17707 334 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 SDC1P18827 310 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 CD22P20273 847 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 PDHA2P29803 388 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 PDGFRLQ15198 375 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 CCSMST1Q4G0I0 132 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 SFTPA1Q8IWL2 248 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 MSRB3Q8IXL7 192 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 TBC1D21Q8IYX1 336 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 DTWD1Q8N5C7 304 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 TERB1Q8NA31 727 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 FOXJ1Q92949 421 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 APIPQ96GX9 242 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 ABHD8Q96I13 439 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 NSMCE2Q96MF7 247 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 FOPNLQ96NB1 174 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 CCDC115Q96NT0 180 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 GBP5Q96PP8 586 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 TRPV4Q9HBA0 871 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 SLC25A37Q9NYZ2 338 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 GDE1Q9NZC3 331 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 GULP1Q9UBP9 304 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 KIAA1549LQ6ZVL6 1849 aa19.15■□□□□ 0.66
PCDHB11-202ENST00000624887 NPC1O15118 1278 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 LILRB5O75023 590 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 C6P13671 934 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 PBLDP30039 288 aaPredicted RBP19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 BDKRB1P46663 353 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 CCT8P50990 548 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 DPTQ07507 201 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 PCDH1Q08174 1060 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 CSTF3Q12996 717 aaKnown RBP19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 NAE1Q13564 534 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 GK3PQ14409 553 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 XKR6Q5GH73 641 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 FOXB2Q5VYV0 432 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 EPHX4Q8IUS5 362 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 CHERPQ8IWX8 916 aaKnown RBP19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 TESCQ96BS2 214 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 TRAPPC9Q96Q05 1148 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 SH3GL1Q99961 368 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 THG1LQ9NWX6 298 aaKnown RBP19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 AP3M1Q9Y2T2 418 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 CROCCQ5TZA2 2017 aa19.14■□□□□ 0.65
PCDHB11-202ENST00000624887 TRBV5-3A0A0A0MS03 114 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 FAM149AA5PLN7 773 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 SAC3D1A6NKF1 404 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 K7ESM1 405 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 PSMC3P17980 439 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 GGT1P19440 569 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 FCARP24071 287 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TACR1P25103 407 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 IMPA1P29218 277 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 PHC1P78364 1004 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 TXNL4AP83876 142 aaKnown RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 CYP4F3Q08477 520 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 RUNDC3AQ59EK9 446 aa19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 GET4Q7L5D6 327 aaPredicted RBP19.13■□□□□ 0.65
PCDHB11-202ENST00000624887 ST13P5Q8NFI4 369 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms