RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 PHACTR4Q8IZ21 702 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLEC4FQ8N1N0 589 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 TMEM132CQ8N3T6 1108 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 FAM86B1Q8N7N1 296 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 BEND7Q8N7W2 519 aaPredicted RBP8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 ASZ1Q8WWH4 475 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 ELMO1Q92556 727 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 SCAMP4Q969E2 229 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 TESCQ96BS2 214 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 SDCCAG3Q96C92 435 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 TCEAL4Q96EI5 215 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC47A1Q96FL8 570 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 FRG2BQ96QU4 278 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 HEPHQ9BQS7 1158 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 CPPED1Q9BRF8 314 aaPredicted RBP8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 SOX17Q9H6I2 414 aaPredicted RBP8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 SERHLQ9NQF3 203 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 SPHK2Q9NRA0 654 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 TDP1Q9NUW8 608 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 DDX18Q9NVP1 670 aaKnown RBP8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 ERVW-1Q9UQF0 538 aa8.1□□□□□ -1.11
SND1-IT1-201ENST00000623342 G3V2T6 193 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 H0Y858 1186 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ABCB7O75027 752 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 CST1P01037 141 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 FTH1P02794 183 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 RETP07949 1114 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 LINC00271P0C7V0 271 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 THRBP10828 461 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 SDC1P18827 310 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 POLR2EP19388 210 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ITPKAP23677 461 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 HALP42357 657 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 EPHA5P54756 1037 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 KCNC3Q14003 757 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 NKG7Q16617 165 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 C11orf91Q3C1V1 193 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ARHGAP15Q53QZ3 475 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 CCNYL2Q5T2Q4 361 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 GPR149Q86SP6 731 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ERI1Q8IV48 349 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 POP5Q969H6 163 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 NCLNQ969V3 563 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 FBXL8Q96CD0 374 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TIFAQ96CG3 184 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 FAM120BQ96EK7 910 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 APIPQ96GX9 242 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 RDH12Q96NR8 316 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TSSK3Q96PN8 268 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TCF25Q9BQ70 676 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 RAD18Q9NS91 495 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC6A13Q9NSD5 602 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 DCAF13Q9NV06 445 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TRIM43BA6NCK2 446 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 QSOX1O00391 747 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 SGTAO43765 313 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PRAMEF4O60810 478 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 MOSPD3O75425 235 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 LEFTY1O75610 366 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 CREG1O75629 220 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PRKD3O94806 890 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLCO2B1O94956 709 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 JUPP14923 745 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TCF3P15923 654 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 HOXB9P17482 250 aaPredicted RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 HOXB6P17509 224 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PTPN2P17706 415 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 AMD1P17707 334 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TACR1P25103 407 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 GZMMP51124 257 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 HNRNPFP52597 415 aaKnown RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PFN3P60673 137 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 CHIT1Q13231 466 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PLCL1Q15111 1095 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PON2Q15165 354 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PGS1Q32NB8 556 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZIK1Q3SY52 487 aaPredicted RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 LY6G5CQ5SRR4 150 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 PRAMEF9Q5VWM5 478 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 LIPJQ5W064 366 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TMEM215Q68D42 235 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 MSANTD1Q6ZTZ1 278 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 Q6ZVL8 140 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 OTOP2Q7RTS6 562 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 CYP2U1Q7Z449 544 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 SPRED2Q7Z698 418 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 RASGRP3Q8IV61 690 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 SVOPLQ8N434 492 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TRAM1L1Q8N609 369 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 DDHD1Q8NEL9 900 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 CSGALNACT1Q8TDX6 532 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 TRIM43Q96BQ3 446 aaPredicted RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 DTNBP1Q96EV8 351 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 APOLD1Q96LR9 279 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 INPP5KQ9BT40 448 aa8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 NPLQ9BXD5 320 aaPredicted RBP8.09□□□□□ -1.11
SND1-IT1-201ENST00000623342 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms