RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 RNASEH1O60930 286 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 ZSCAN5DPP0CG00 497 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 IGHV4-31P0DP07 118 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 GATA1P15976 413 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM21P19474 475 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 OPRL1P41146 370 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 PSMC6P62333 389 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 NR1D2Q14995 579 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 FASTKD1Q53R41 847 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 TCTE1Q5JU00 501 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 SPINK14Q6IE38 97 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 SUSD1Q6UWL2 747 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 CCDC73Q6ZRK6 1079 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 HOGA1Q86XE5 327 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 PHLDA1Q8WV24 401 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 BARD1Q99728 777 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 MAK16Q9BXY0 300 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 SHARPINQ9H0F6 387 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 ABCG4Q9H172 646 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 FGF21Q9NSA1 209 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 NFKBIL1Q9UBC1 381 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 PTRH2Q9Y3E5 179 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 GRIP1Q9Y3R0 1128 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 COL5A2P05997 1499 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 PCDH11YQ9BZA8 1340 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 ZNF644Q9H582 1327 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 ANKRD61A6NGH8 418 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 ZBED4O75132 1171 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 AVILO75366 819 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 BCL10O95999 233 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 GATA2P23769 480 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 GCH1P30793 250 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 NRIP1P48552 1158 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 GRAPQ13588 217 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 E2F5Q15329 346 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 PTPN14Q15678 1187 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 PKN2Q16513 984 aaKnown RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 ZNF239Q16600 458 aaKnown RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 UGP2Q16851 508 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 TCTEX1D4Q5JR98 221 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 PLEKHS1Q5SXH7 462 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 BSPRYQ5W0U4 402 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 KRT79Q5XKE5 535 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 DHRS7BQ6IAN0 325 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM65Q6PJ69 517 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 BTN2A1Q7KYR7 527 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 RTN4RL2Q86UN3 420 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 EGFL6Q8IUX8 553 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 SPAG16Q8N0X2 631 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 EID3Q8N140 333 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 C17orf53Q8N3J3 647 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 AFAP1Q8N556 730 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 ZNF300Q96RE9 604 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 KIFC3Q9BVG8 833 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 PDRG1Q9NUG6 133 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 MRGBPQ9NV56 204 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 P4HTMQ9NXG6 502 aa3.72□□□□□ -1.81
BRCA1-229ENST00000621897 WBP11Q9Y2W2 641 aaKnown RBP3.72□□□□□ -1.81
BRCA1-229ENST00000621897 LOC102723996A0A087X1L8 192 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 TMEM221A6NGB7 291 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-229ENST00000621897 TOMM70O94826 608 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 DDHD2O94830 711 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 OR2T7P0C7T2 308 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 HSPA8P11142 646 aaKnown RBP3.71□□□□□ -1.82
BRCA1-229ENST00000621897 PTPN3P26045 913 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 LEPRP48357 1165 aaKnown RBP3.71□□□□□ -1.82
BRCA1-229ENST00000621897 GSDMDP57764 484 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 GCNT1Q02742 428 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 ZNF415Q09FC8 603 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 TRIM29Q14134 588 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 MEA1Q16626 185 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 ELFN2Q5R3F8 820 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 MFSD4BQ5TF39 518 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 TMEM211Q6ICI0 200 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 CDK20Q8IZL9 346 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 POC5Q8NA72 575 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 MSANTD4Q8NCY6 345 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 OR52N5Q8NH56 324 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-229ENST00000621897 OMA1Q96E52 524 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 NSMCE3Q96MG7 304 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 BAG1Q99933 345 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-229ENST00000621897 PIGQQ9BRB3 760 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 ADPGKQ9BRR6 497 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 CCDC68Q9H2F9 335 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 CPVLQ9H3G5 476 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 GHITMQ9H3K2 345 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 Q9N2K0 584 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 SERINC1Q9NRX5 453 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 DCAF16Q9NXF7 216 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 GPR34Q9UPC5 381 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 PPP2R2CQ9Y2T4 447 aa3.71□□□□□ -1.82
BRCA1-229ENST00000621897 FSD2A1L4K1 749 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 NXPH2O95156 264 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 ATP6V1B1P15313 513 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 CYP2A7P20853 494 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 MUTP22033 750 aa3.7□□□□□ -1.82
BRCA1-229ENST00000621897 SHC1P29353 583 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms