RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LOC100506127A0A0U1RQW1 187 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 BBIP1A8MTZ0 92 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 MAGEB17A8MXT2 336 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PAX7P23759 505 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 IL12BP29460 328 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ACSBG2Q5FVE4 666 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 CRTC1Q6UUV9 634 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ZNF730Q6ZMV8 503 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PEX5LQ8IYB4 626 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 TMEM156Q8N614 296 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 OR9A1PQ8NGU1 263 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 SHKBP1Q8TBC3 707 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 HLA-CQ95604 372 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 RGMAQ96B86 450 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 IL17FQ96PD4 163 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 TEFMQ96QE5 360 aaKnown RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 SERTAD3Q9UJW9 196 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 LINC01553A4QN01 128 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 GNB5O14775 395 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 TPST2O60704 377 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 LATS1O95835 1130 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 CCKBRP32239 447 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 TALDO1P37837 337 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ARSDP51689 593 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 NCBP2P52298 156 aaKnown RBP eCLIP9.02□□□□□ -0.974e-7■■■■■ 29.5
GGA3-223ENST00000621870 CSNK2BP67870 215 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 DPYSQ14117 519 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 RNF168Q8IYW5 571 aaPredicted RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 IL22RA1Q8N6P7 574 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 RPLP0P6Q8NHW5 317 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 DCAKDQ8WVC6 231 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ARMC5Q96C12 935 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ZNF354BQ96LW1 612 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 HHIPQ96QV1 700 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 NELL2Q99435 816 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 S100A13Q99584 98 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 NUSAP1Q9BXS6 441 aaKnown RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 RBCK1Q9BYM8 510 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ELL3Q9HB65 397 aaPredicted RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 NLE1Q9NVX2 485 aaPredicted RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 PCDH10Q9P2E7 1040 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PDP2Q9P2J9 529 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ACSL5Q9ULC5 683 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 MAFFQ9ULX9 164 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 SAMD4AQ9UPU9 718 aaKnown RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 SVILO95425 2214 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PEX12O00623 359 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 MUSKO15146 869 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PAPSS2O95340 614 aaPredicted RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 IFNW1P05000 195 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 JUNP05412 331 aaKnown RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 ALOX5P09917 674 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 THEGLP0DJG4 465 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 FOXN2P32314 431 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 MTPNP58546 118 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 DEFA1P59665 94 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 DEFA3P59666 94 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ZNF234Q14588 700 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PSAPL1Q6NUJ1 521 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 METTL27Q8N6F8 245 aaPredicted RBP9.02□□□□□ -0.97
GGA3-223ENST00000621870 FITM2Q8N6M3 262 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 OR4F6Q8NGB9 312 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 TEX47Q8TBZ9 253 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 MIEF2Q96C03 454 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 SLC35G5Q96KT7 338 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 CEP295NLQ96MC4 621 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 RTKNQ9BST9 563 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 LRMDAQ9H2I8 198 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 ALG2Q9H553 416 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 OXSMQ9NWU1 459 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
GGA3-223ENST00000621870 FAM25AB3EWG3 89 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 FAM25CB3EWG5 89 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 FAM25GB3EWG6 89 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 GSRP00390 522 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 C5AR1P21730 350 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SOX6P35712 828 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 HMGCLP35914 325 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 DGKQP52824 942 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ZNF252P-AS1Q0IIN9 211 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 NR1D2Q14995 579 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 INAQ16352 499 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 NAIF1Q69YI7 327 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 NEK10Q6ZWH5 1172 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 CNTD1Q8N815 330 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 OR5AK3PQ8NH89 298 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 TLCD1Q96CP7 247 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ZNF184Q99676 751 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 DCUN1D5Q9BTE7 237 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 MARCH4Q9P2E8 410 aaPredicted RBP9.01□□□□□ -0.97
GGA3-223ENST00000621870 MYRFQ9Y2G1 1151 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 LRCH1Q9Y2L9 728 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 GLOD5A6NK44 160 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ZNF487B1APH4 448 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 HCN1O60741 890 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 CDH1P12830 882 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 IRS1P35568 1242 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ERVK-8P63133 956 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 ID2Q02363 134 aa9.01□□□□□ -0.97
GGA3-223ENST00000621870 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms