RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CTDSP2O14595 271 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 RAB5BP61020 215 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SEMG2Q02383 582 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 PNPLA1Q8N8W4 532 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 BRSK1Q8TDC3 778 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 HAVCR2Q8TDQ0 301 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ARL6Q9H0F7 186 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 METTL8Q9H825 291 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 MFSD11O43934 449 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 MYL4P12829 197 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CXCR2P25025 360 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 DCKP27707 260 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 GSTM2P28161 218 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 KCNAB2Q13303 367 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TREML2Q5T2D2 321 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CPTPQ5TA50 214 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 FAM151BQ6UXP7 276 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SPATA2LQ8IUW3 424 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 COLGALT2Q8IYK4 626 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 THEM5Q8N1Q8 247 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SETD6Q8TBK2 473 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SLC9A6Q92581 669 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 HAPLN3Q96S86 360 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 PRDM12Q9H4Q4 367 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 RANBP3Q9H6Z4 567 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ERVV-1B6SEH8 477 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ARPC5O15511 151 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ATG12O94817 140 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CD72P21854 359 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 MAPK1P28482 360 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 AKR1C3P42330 323 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 HLCSP50747 726 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 EFEMP1Q12805 493 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CARNMT1Q8N4J0 409 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM39BQ9GZU3 492 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 RHBGQ9H310 441 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TLR8Q9NR97 1041 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SEMA3GQ9NS98 782 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TMPRSS11EQ9UL52 423 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CTSHP09668 335 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 UBA1P22314 1058 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SLC1A2P43004 574 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SPP2Q13103 211 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ESCO2Q56NI9 601 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SYVN1Q86TM6 617 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 PSTKQ8IV42 348 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ADGRF2Q8IZF7 708 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TFAP2CQ92754 450 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 EXO5Q9H790 373 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CATSPERBQ9H7T0 1116 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 IFT46Q9NQC8 304 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SETD4Q9NVD3 440 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 PPP1R11O60927 126 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ADAM15Q13444 863 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ELOAQ14241 798 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SLC6A19Q695T7 634 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TBPL2Q6SJ96 375 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 LRRC46Q96FV0 321 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ARL15Q9NXU5 204 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 NARFQ9UHQ1 456 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CLCA1A8K7I4 914 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 DGAT1O75907 488 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 NDST3O95803 873 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 GLUD1P00367 558 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 VTNP04004 478 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CYP2A7P20853 494 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 PPP5CP53041 499 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TATDN3Q17R31 274 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SBK1Q52WX2 424 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CORO6Q6QEF8 472 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 FSTL5Q8N475 847 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 MAPK15Q8TD08 544 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 COQ8BQ96D53 544 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 AURKBQ96GD4 344 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 NSUN5Q96P11 429 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 POLR2J2Q9GZM3 115 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ACTR6Q9GZN1 396 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SDCBP2Q9H190 292 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CFL2Q9Y281 166 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CSF1RP07333 972 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 ACPPP15309 386 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 SLC18A1P54219 525 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TGFB2P61812 414 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 BRMS1LQ5PSV4 323 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TIPARPQ7Z3E1 657 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TOMM5Q8N4H5 51 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 FCRL3Q96P31 734 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 APOBEC3GQ9HC16 384 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 PCDH17O14917 1159 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 RP2O75695 350 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 MT-CYBP00156 380 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 NUDT7P0C024 238 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 VIPR1P32241 457 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CDK18Q07002 472 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 UGCGQ16739 394 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 HIST2H2ACQ16777 129 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 AQP11Q8NBQ7 271 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TXNDC5Q8NBS9 432 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms