RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 EPB42P16452 691 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 NPPBP16860 134 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ENGP17813 658 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CCND1P24385 295 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ARRB2P32121 409 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SHMT2P34897 504 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CCR10P46092 362 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 FASLGP48023 281 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PIK3CGP48736 1102 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 OCRLQ01968 901 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 HHEXQ03014 270 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PCDH1Q08174 1060 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 FASTKQ14296 549 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CCDC6Q16204 474 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 C14orf28Q4W4Y0 310 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CAPN13Q6MZZ7 669 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ATG14Q6ZNE5 492 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 TMEM26Q6ZUK4 368 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 FRMD7Q6ZUT3 714 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 RPS27LQ71UM5 84 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 LRRC70Q7Z2Q7 622 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 THOC6Q86W42 341 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 AMIGO1Q86WK6 493 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 LRRC34Q8IZ02 419 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 C2orf73Q8N5S3 287 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 TEX9Q8N6V9 391 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PPFIBP2Q8ND30 876 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 OR4E2Q8NGC2 313 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 OR2L8Q8NGY9 312 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 TRPC4APQ8TEL6 797 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 LCN9Q8WX39 176 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SMPDL3AQ92484 453 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ATOH1Q92858 354 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SH3KBP1Q96B97 665 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PYCR2Q96C36 320 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CHMP6Q96FZ7 201 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 C7orf26Q96N11 449 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 NSUN5Q96P11 429 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SORT1Q99523 831 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 NRTNQ99748 197 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 MIPEPQ99797 713 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SGPP1Q9BX95 441 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 RAB11FIP5Q9BXF6 653 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PITPNM3Q9BZ71 974 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ILKAPQ9H0C8 392 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PCBD2Q9H0N5 130 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 EPN3Q9H201 632 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 KCNH6Q9H252 994 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SMOC1Q9H4F8 434 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 XKR8Q9H6D3 395 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 NOL11Q9H8H0 719 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 IPPKQ9H8X2 491 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 UCK1Q9HA47 277 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 EML4Q9HC35 981 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ZBTB26Q9HCK0 441 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SLCO1B3Q9NPD5 702 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 DNAJC11Q9NVH1 559 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 NLGN3Q9NZ94 848 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 OR6C2Q9NZP2 312 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 OPTCQ9UBM4 332 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 GMEB2Q9UKD1 530 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ICKQ9UPZ9 632 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ANGPTL3Q9Y5C1 460 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 FAM221BA6H8Z2 402 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 TRIM38O00635 465 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 UBFD1O14562 309 aaKnown RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 OR7A17O14581 309 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PRICKLE3O43900 615 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 EDF1O60869 148 aaKnown RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 KATNA1O75449 491 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LYPLA1O75608 230 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ESRRBO95718 433 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 HSPA4LO95757 839 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 CHRNGP07510 517 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 FGF4P08620 206 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF883P0CG24 379 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ALPPL2P10696 532 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 TSPAN8P19075 237 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PKLRP30613 574 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 CCT8P50990 548 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SEC24CP53992 1094 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ATXN3P54252 364 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PKNOX1P55347 436 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 MAZP56270 477 aaKnown RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SH3BP2P78314 561 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 CBX1P83916 185 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LCP2Q13094 533 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PRKAA1Q13131 559 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 GPR18Q14330 331 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LAPTM4AQ15012 233 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SUSD1Q6UWL2 747 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LCTLQ6UWM7 567 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 DBX2Q6ZNG2 339 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 GOLGA7Q7Z5G4 137 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 MILR1Q7Z6M3 343 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 GATAD2AQ86YP4 633 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 CRLF3Q8IUI8 442 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms