RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 LATO43561 262 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 NRP2O60462 931 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 PRR35P0CG20 571 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 CAPN3P20807 821 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 RPL10P27635 214 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 ACSL1P33121 698 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 TRIM23P36406 574 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 ERVK-8P63133 956 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 IRX1P78414 480 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 HMGCS1Q01581 520 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 STX5Q13190 355 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 OGFOD2Q6N063 350 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SPATA19Q7Z5L4 167 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SYTL1Q8IYJ3 562 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 PGBD3Q8N328 593 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 BHLHE22Q8NFJ8 381 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 NUDT8Q8WV74 236 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SERPINI1Q99574 410 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 OSGEPL1Q9H4B0 414 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 PRM3Q9NNZ6 103 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 MMP17Q9ULZ9 603 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 LSM1O15116 133 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 MYCLP1P12525 358 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 ACP5P13686 325 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 ATP6V1C1P21283 382 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 ME2P23368 584 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 CHIT1Q13231 466 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 GSTA3Q16772 222 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 AP5B1Q2VPB7 878 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 IZUMO2Q6UXV1 221 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 DHDDSQ86SQ9 333 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SYNPOQ8N3V7 929 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 CDX2Q99626 313 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SLC25A23Q9BV35 468 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 DPEP2Q9H4A9 486 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 ELOVL6Q9H5J4 265 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 SDR39U1Q9NRG7 319 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 AIG1Q9NVV5 245 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 CA14Q9ULX7 337 aa12.34□□□□□ -0.43
TNFAIP3-209ENST00000619035 E7EQ34 232 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 KMOO15229 486 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 RGS14O43566 566 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 DNAJA2O60884 412 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 KRT6AP02538 564 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 KRT6BP04259 564 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 GABRG2P18507 467 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 KRT6CP48668 564 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 TPMTP51580 245 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 NEK2P51955 445 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 CLDN2P57739 230 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 RPL38P63173 70 aaKnown RBP12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 IRF8Q02556 426 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 CAPRIN1Q14444 709 aaKnown RBP12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 XKR6Q5GH73 641 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 AAGABQ6PD74 315 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 FBXO15Q8NCQ5 510 aaPredicted RBP12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 OR5AR1Q8NGP9 310 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 SELENOMQ8WWX9 145 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLC29A3Q9BZD2 475 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 ZDHHC5Q9C0B5 715 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 OR52A5Q9H2C5 316 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 MRPL40Q9NQ50 206 aaKnown RBP12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 PLAGL1Q9UM63 463 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 CA5BQ9Y2D0 317 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 TDRKHQ9Y2W6 561 aaKnown RBP12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 POLR3HQ9Y535 204 aaPredicted RBP12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 GPR45Q9Y5Y3 372 aa12.33□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRORSD1PA6NEY8 169 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PDYNP01213 254 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 FUCA1P04066 466 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLC2A4P14672 509 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 FOSL2P15408 326 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PEX2P28328 305 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 ACADVLP49748 655 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 CLNS1AP54105 237 aaKnown RBP12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 TFF2Q03403 129 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 RPA4Q13156 261 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRKG2Q13237 762 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 RFTN2Q52LD8 501 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRAMEF9Q5VWM5 478 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PTCRAQ6ISU1 281 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 ZNF480Q8WV37 535 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 JADE3Q92613 823 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 VPS33AQ96AX1 596 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 SNX6Q9UNH7 406 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 CACNB4O00305 520 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLC28A1O00337 649 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 SLC35G4P0C7Q5 338 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 ACADLP28330 430 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 UFM1P61960 85 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 TBPL1P62380 186 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 PRKCQQ04759 706 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 TCEA2Q15560 299 aa12.32□□□□□ -0.44
TNFAIP3-209ENST00000619035 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms