RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	CBX3	Q13185	183 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	ZNF260	Q3ZCT1	412 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	IQCC	Q4KMZ1	466 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	SPDYC	Q5MJ68	293 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	CYP4A22	Q5TCH4	519 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	SFR1	Q86XK3	245 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	RYBP	Q8N488	228 aa	Predicted RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	KCNH5	Q8NCM2	988 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	BCL2L2	Q92843	193 aa	Predicted RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	P2RX5	Q93086	422 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	THOC1	Q96FV9	657 aa	Known RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	ADGRG7	Q96K78	797 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	C17orf77	Q96MU5	243 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	ZNF48	Q96MX3	618 aa	Predicted RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	LSG1	Q9H089	658 aa	Known RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	SNX25	Q9H3E2	840 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	EBF2	Q9HAK2	575 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	PA2G4	Q9UQ80	394 aa	Known RBP	5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	TMED3	Q9Y3Q3	217 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	CACNA1I	Q9P0X4	2223 aa		5.19	□□□□□ -1.58
PVT1-225	ENST00000617087	MAGEA13P	A6NCF6	341 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	KBTBD13	C9JR72	458 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	PLOD2	O00469	737 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	ZBTB14	O43829	449 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	AKAP3	O75969	853 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	C9	P02748	559 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	HMOX1	P09601	288 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	ANKRD34C	P0C6C1	535 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	DAO	P14920	347 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	JAK1	P23458	1154 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	CLK1	P49759	484 aa	Known RBP	5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	ZNF81	P51508	661 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	NME5	P56597	212 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	YBEY	P58557	167 aa	Predicted RBP	5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	BPIFB3	P59826	476 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	ILF2	Q12905	390 aa	Known RBP	5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	NPRL3	Q12980	569 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	SNTA1	Q13424	505 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	HFE	Q30201	348 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	PHLDA2	Q53GA4	152 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	ASPRV1	Q53RT3	343 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	PODNL1	Q6PEZ8	512 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	BTNL8	Q6UX41	500 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	PIGW	Q7Z7B1	504 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	NDUFAF2	Q8N183	169 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	SFRP1	Q8N474	314 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	IQCF1	Q8N6M8	205 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	OR4K1	Q8NGD4	311 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	NCOA7	Q8NI08	942 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	PRRG4	Q9BZD6	226 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	FKRP	Q9H9S5	495 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	PELI2	Q9HAT8	420 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	OLFML3	Q9NRN5	406 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	TMEM161A	Q9NX61	479 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	TRPC4	Q9UBN4	977 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	DAPK2	Q9UIK4	370 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	MOSPD1	Q9UJG1	213 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	POU2F3	Q9UKI9	436 aa		5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	TRIP12	Q14669	1992 aa	Predicted RBP	5.18	□□□□□ -1.58
PVT1-225	ENST00000617087	ASPDH	A6ND91	283 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	RTCA	O00442	366 aa	Known RBP	5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	PGRMC2	O15173	223 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	CTDSPL	O15194	276 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	SYNGR3	O43761	229 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	RPS6KA5	O75582	802 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	OAZ2	O95190	189 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	BAG4	O95429	457 aa	Known RBP	5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	ACAA1	P09110	424 aa	Predicted RBP	5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	EPOR	P19235	508 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	CTNNB1	P35222	781 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	MNDA	P41218	407 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	PDLIM4	P50479	330 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	FUT6	P51993	359 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	FOLH1	Q04609	750 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	MBTD1	Q05BQ5	628 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	KIF5A	Q12840	1032 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	SGCB	Q16585	318 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	AARD	Q4LEZ3	155 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	STXBP5	Q5T5C0	1151 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	RAB12	Q6IQ22	244 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	PRSS55	Q6UWB4	352 aa	Predicted RBP	5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	ANKRD33	Q7Z3H0	272 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	AMIGO1	Q86WK6	493 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	TMEM139	Q8IV31	216 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	ZNF619	Q8N2I2	560 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	LPCAT1	Q8NF37	534 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	FAM20A	Q96MK3	541 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	TRAF4	Q9BUZ4	470 aa	Predicted RBP	5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	SLC29A3	Q9BZD2	475 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	THAP9	Q9H5L6	903 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	TCF7L2	Q9NQB0	619 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	PNPLA3	Q9NST1	481 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	SPHK1	Q9NYA1	384 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	SPG21	Q9NZD8	308 aa		5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.17	□□□□□ -1.58
PVT1-225	ENST00000617087	APPL1	Q9UKG1	709 aa		5.17	□□□□□ -1.58

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