RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 DCDP81605 110 aaKnown RBP18.24■□□□□ 0.51
CDX1-202ENST00000616154 BRD3Q15059 726 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 SLC5A12Q1EHB4 618 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 SYTL3Q4VX76 610 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 C1orf189Q5VU69 101 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 TLDC1Q6P9B6 456 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 CEP112Q8N8E3 955 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 MNS1Q8NEH6 495 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 SLCO2A1Q92959 643 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 FER1L6-AS2Q96M78 137 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 CATSPERZQ9NTU4 200 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 MARCH4Q9P2E8 410 aaPredicted RBP18.24■□□□□ 0.51
CDX1-202ENST00000616154 PCYOX1Q9UHG3 505 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 SOX13Q9UN79 622 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 SRPK3Q9UPE1 567 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 TDRKHQ9Y2W6 561 aaKnown RBP18.24■□□□□ 0.51
CDX1-202ENST00000616154 PTRH2Q9Y3E5 179 aaKnown RBP18.24■□□□□ 0.51
CDX1-202ENST00000616154 KDM1AO60341 852 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 MLNP12872 115 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 TTPAP49638 278 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 CRADDP78560 199 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 RAPSNQ13702 412 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 KIR2DS3Q14952 304 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 NAPRTQ6XQN6 538 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 DNAJC22Q8N4W6 341 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 MCUQ8NE86 351 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 OR2Y1Q8NGV0 311 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 CARD6Q9BX69 1037 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 P2RY12Q9H244 342 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 SYBUQ9NX95 663 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 IFT80Q9P2H3 777 aaPredicted RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 NDOR1Q9UHB4 597 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 PLAGL1Q9UM63 463 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 CDYLQ9Y232 598 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 PEX12O00623 359 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 PRMT5O14744 637 aaPredicted RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 CD3EAPO15446 510 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 KLHL41O60662 606 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 GPC4O75487 556 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 KRT14P02533 472 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 CTSBP07858 339 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 RPS3P23396 243 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDX1-202ENST00000616154 MGAT1P26572 445 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 NMBRP28336 390 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 PEBP1P30086 187 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 MAGEA3P43357 314 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 SARNPP82979 210 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 GPS1Q13098 491 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 MYBPC3Q14896 1274 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 KYNUQ16719 465 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 DCAF10Q5QP82 559 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 KIAA0930Q6ICG6 404 aaPredicted RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 MRPL14Q6P1L8 145 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 CCDC137Q6PK04 289 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 CAND1Q86VP6 1230 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 LRRC6Q86X45 466 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 SLC22A15Q8IZD6 547 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 GALNT16Q8N428 558 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 ZNF655Q8N720 491 aaPredicted RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 CLEC1AQ8NC01 280 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 MFSD3Q96ES6 412 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 TXLNGQ9NUQ3 528 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 DHCR7Q9UBM7 475 aaKnown RBP18.23■□□□□ 0.51
CDX1-202ENST00000616154 PLCL2Q9UPR0 1127 aa18.23■□□□□ 0.51
CDX1-202ENST00000616154 DOCK10Q96BY6 2186 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 CTAGE15A4D2H0 777 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 ISM1B1AKI9 464 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 CNOT3O75175 753 aaKnown RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 ALPPP05187 535 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 CTAGE8P0CG41 777 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 RNF224P0DH78 156 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 PKLRP30613 574 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 CCR7P32248 378 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 RAB28P51157 221 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 ADARP55265 1226 aaKnown RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 MRPL49Q13405 166 aaKnown RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 TRIP13Q15645 432 aaPredicted RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 TYSND1Q2T9J0 566 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 PLEKHN1Q494U1 663 aaPredicted RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 NKAIN1Q4KMZ8 207 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 DNAJC21Q5F1R6 531 aaKnown RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 ANKRD22Q5VYY1 191 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 IGFL3Q6UXB1 125 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 PPP1R32Q7Z5V6 425 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 CTAGE6Q86UF2 777 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 CTAGE4Q8IX94 777 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 IQCKQ8N0W5 287 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 MMGT1Q8N4V1 131 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 PTERQ96BW5 349 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 RUNDC3BQ96NL0 473 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 TSSK1BQ9BXA7 367 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 DDX47Q9H0S4 455 aaKnown RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 XAB2Q9HCS7 855 aaKnown RBP18.22■□□□□ 0.51
CDX1-202ENST00000616154 P4HTMQ9NXG6 502 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 MAP10Q9P2G4 905 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 ANAPC5Q9UJX4 755 aa18.22■□□□□ 0.51
CDX1-202ENST00000616154 SLCO2B1O94956 709 aa18.21■□□□□ 0.51
CDX1-202ENST00000616154 DDAH2O95865 285 aa18.21■□□□□ 0.51
CDX1-202ENST00000616154 GCGRP47871 477 aa18.21■□□□□ 0.51
CDX1-202ENST00000616154 SOX8P57073 446 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms