RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 YOD1Q5VVQ6 348 aaPredicted RBP17.06■□□□□ 0.32
SSBP1-215ENST00000612337 FCRL6Q6DN72 434 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
SSBP1-215ENST00000612337 TMEM151BQ8IW70 566 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 KRT222Q8N1A0 295 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 LMNTD1Q8N9Z9 388 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 TM9SF4Q92544 642 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 SNRNP40Q96DI7 357 aaKnown RBP17.06■□□□□ 0.32
SSBP1-215ENST00000612337 C19orf60Q96EN9 201 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 RAB11FIP5Q9BXF6 653 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 ATP13A2Q9NQ11 1180 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 CHRAC1Q9NRG0 131 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 MARCH4Q9P2E8 410 aaPredicted RBP17.06■□□□□ 0.32
SSBP1-215ENST00000612337 SLC39A10Q9ULF5 831 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 AGPSO00116 658 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 CD3EAPO15446 510 aaKnown RBP17.05■□□□□ 0.32
SSBP1-215ENST00000612337 KRT86O43790 486 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 DDAH2O95865 285 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 RNF224P0DH78 156 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 PIM1P11309 404 aaPredicted RBP17.05■□□□□ 0.32
SSBP1-215ENST00000612337 MMP11P24347 488 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 SNX1Q13596 522 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 SF1Q15637 639 aaKnown RBP17.05■□□□□ 0.32
SSBP1-215ENST00000612337 ZC3H12BQ5HYM0 836 aaKnown RBP17.05■□□□□ 0.32
SSBP1-215ENST00000612337 TCTE1Q5JU00 501 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 PTRHD1Q6GMV3 140 aaKnown RBP17.05■□□□□ 0.32
SSBP1-215ENST00000612337 FIGLAQ6QHK4 219 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 OVCH1Q7RTY7 1134 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 ZUFSPQ96AP4 578 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 ZNF285Q96NJ3 590 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 PANX3Q96QZ0 392 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 P2RY12Q9H244 342 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 SLC26A1Q9H2B4 701 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 WDR54Q9H977 334 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 EIF2B3Q9NR50 452 aaKnown RBP17.05■□□□□ 0.32
SSBP1-215ENST00000612337 TREX1Q9NSU2 369 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 CUTCQ9NTM9 273 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 ASF1BQ9NVP2 202 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 GNPTGQ9UJJ9 305 aa17.05■□□□□ 0.32
SSBP1-215ENST00000612337 CNTRLQ7Z7A1 2325 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 DOCK10Q96BY6 2186 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 ITPR2Q14571 2701 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 MASP2O00187 686 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 DSCR3O14972 297 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 PRICKLE3O43900 615 aaPredicted RBP17.04■□□□□ 0.32
SSBP1-215ENST00000612337 GRIA3P42263 894 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 SESN2P58004 480 aaPredicted RBP17.04■□□□□ 0.32
SSBP1-215ENST00000612337 AIMP2Q13155 320 aaKnown RBP17.04■□□□□ 0.32
SSBP1-215ENST00000612337 GRM7Q14831 915 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 NR6A1Q15406 480 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 CRYBG3Q68DQ2 2970 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 HIST2H2BCQ6DN03 193 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 MPP5Q8N3R9 675 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 ZADH2Q8N4Q0 377 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 CISD2Q8N5K1 135 aaKnown RBP17.04■□□□□ 0.32
SSBP1-215ENST00000612337 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 PRR7Q8TB68 274 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 RAD51AP1Q96B01 352 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 SPSB2Q99619 263 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 SELENOSQ9BQE4 189 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 TSGA10Q9BZW7 698 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
SSBP1-215ENST00000612337 MRFAP1Q9Y605 127 aa17.04■□□□□ 0.32
SSBP1-215ENST00000612337 FITM1A5D6W6 292 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 TARM1B6A8C7 271 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 KPNA5O15131 536 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 CBX6O95503 412 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 ZSCAN5DPP0CG00 497 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 RPS3P23396 243 aaKnown RBP eCLIP17.03■□□□□ 0.324e-7■■□□□ 12.3
SSBP1-215ENST00000612337 MCM3P25205 808 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 ITGA3P26006 1051 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 CDC25BP30305 580 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 RPL22P35268 128 aaKnown RBP17.03■□□□□ 0.32
SSBP1-215ENST00000612337 CCNG2Q16589 344 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 NKG7Q16617 165 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 CRB2Q5IJ48 1285 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 Q6ZS92 163 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 COX15Q7KZN9 410 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 OTOAQ7RTW8 1153 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 TTC29Q8NA56 475 aaPredicted RBP17.03■□□□□ 0.32
SSBP1-215ENST00000612337 HMGCLL1Q8TB92 370 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 INPP5DQ92835 1189 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 IL22Q9GZX6 179 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 MRM3Q9HC36 420 aaKnown RBP17.03■□□□□ 0.32
SSBP1-215ENST00000612337 ZBTB20Q9HC78 741 aaPredicted RBP17.03■□□□□ 0.32
SSBP1-215ENST00000612337 SLC6A20Q9NP91 592 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 CDC23Q9UJX2 597 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 FBXL4Q9UKA2 621 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 TTC7AQ9ULT0 858 aaPredicted RBP17.03■□□□□ 0.32
SSBP1-215ENST00000612337 GUCA1BQ9UMX6 200 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 KLK4Q9Y5K2 254 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 POLEQ07864 2286 aa17.03■□□□□ 0.32
SSBP1-215ENST00000612337 CELSR2Q9HCU4 2923 aa17.02■□□□□ 0.32
SSBP1-215ENST00000612337 AP3B1O00203 1094 aa17.02■□□□□ 0.32
SSBP1-215ENST00000612337 SOCS6O14544 535 aa17.02■□□□□ 0.32
SSBP1-215ENST00000612337 SRPX2O60687 465 aaPredicted RBP17.02■□□□□ 0.32
SSBP1-215ENST00000612337 NDUFS3O75489 264 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms