RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 C17orf64Q86WR6 236 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ERI1Q8IV48 349 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 CROCCP3Q8IVE0 287 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 KRTCAP2Q8N6L1 136 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 IRF7Q92985 503 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ZSCAN5AQ9BUG6 496 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OR2AG1Q9H205 316 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PDFQ9HBH1 243 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 AMBNQ9NP70 447 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 HSFX1Q9UBD0 423 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ZNF229Q9UJW7 825 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 DUSP12Q9UNI6 340 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 NEU3Q9UQ49 428 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TDRKHQ9Y2W6 561 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 FPGTO14772 594 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 WNT9AO14904 365 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 FGF18O76093 207 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CCNDBP1O95273 360 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 NADKO95544 446 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 NR4A1P22736 598 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 ACRV1P26436 265 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 KRT20P35900 424 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CAP1Q01518 475 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 VMACQ2NL98 169 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OR2T5Q6IEZ7 315 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 METTL2BQ6P1Q9 378 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 C11orf96Q7Z7L8 435 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 EGFL6Q8IUX8 553 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PDPRQ8NCN5 879 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 OR2T29Q8NH02 315 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 C12orf43Q96C57 262 aaKnown RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 RDH12Q96NR8 316 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRIM45Q9H8W5 580 aaPredicted RBP6.22□□□□□ -1.41
SNX13-213ENST00000611725 HMG20AQ9NP66 347 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 TRPC4Q9UBN4 977 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 LHX3Q9UBR4 397 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 CDC14AQ9UNH5 594 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 PCDHGB3Q9Y5G1 929 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 KAT6AQ92794 2004 aa6.22□□□□□ -1.41
SNX13-213ENST00000611725 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 E2F3O00716 465 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 APOA1P02647 267 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 RPN2P04844 631 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 FABP3P05413 133 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 HSMCR30P0CW71 290 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 TYRP14679 529 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 ITGA2P17301 1181 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 PREPP48147 710 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 CLDN8P56748 225 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 SP140Q13342 867 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 TP53BP2Q13625 1128 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 C5orf22Q49AR2 442 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 XKR7Q5GH72 579 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 MED27Q6P2C8 311 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 TCF25Q9BQ70 676 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 BRINP2Q9C0B6 783 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 WNK3Q9BYP7 1800 aa6.21□□□□□ -1.41
SNX13-213ENST00000611725 ABLIM3O94929 683 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 RASAL1O95294 804 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 KDELR2P33947 212 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 CDC42P60953 191 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 CD47Q08722 323 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 FGD3Q5JSP0 725 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 NOXRED1Q6NXP6 359 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 CHPFQ8IZ52 775 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 TMCO5AQ8N6Q1 288 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 PHF10Q8WUB8 498 aaKnown RBP6.21□□□□□ -1.42
SNX13-213ENST00000611725 OR8D1Q8WZ84 308 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 GPATCH1Q9BRR8 931 aaKnown RBP6.21□□□□□ -1.42
SNX13-213ENST00000611725 SLC12A9Q9BXP2 914 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 NLNQ9BYT8 704 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 PRMT3O60678 531 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 ZBTB11O95625 1053 aaPredicted RBP6.21□□□□□ -1.42
SNX13-213ENST00000611725 KRT75O95678 551 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 ADH1CP00326 375 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 MYCLP1P12525 358 aaPredicted RBP6.21□□□□□ -1.42
SNX13-213ENST00000611725 SLC5A2P31639 672 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 ETV3P41162 512 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 CLCN7P51798 805 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 HK3P52790 923 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 LAPTM5Q13571 262 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 IHHQ14623 411 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 ATG9BQ674R7 924 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 MACC1Q6ZN28 852 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 PROX1Q92786 737 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 BORCS5Q969J3 196 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 TMIGD2Q96BF3 282 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 OTUB2Q96DC9 234 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 TOR3AQ9H497 397 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 CCDC177Q9NQR7 707 aaPredicted RBP6.21□□□□□ -1.42
SNX13-213ENST00000611725 GIMAP4Q9NUV9 329 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 FAM120CQ9NX05 1096 aaKnown RBP6.21□□□□□ -1.42
SNX13-213ENST00000611725 TMEM9Q9P0T7 183 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 ABCD2Q9UBJ2 740 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 OARD1Q9Y530 152 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 FAM220BPB1ANY3 271 aa6.21□□□□□ -1.42
SNX13-213ENST00000611725 C1QTNF3-AMACRE9PGA6 284 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms