RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 DUSP26Q9BV47 211 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 FBXO9Q9UK97 447 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 C2orf92A0A1B0GVN3 265 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 YES1P07947 543 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 APLP1P51693 650 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 JAM2P57087 298 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 TAF1AQ15573 450 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-205ENST00000609104 HFE2Q6ZVN8 426 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 C17orf50Q8WW18 174 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 MCCC2Q9HCC0 563 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 PLEKHA6Q9Y2H5 1048 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 NR2E3Q9Y5X4 410 aa12.82□□□□□ -0.36
USP6NL-205ENST00000609104 A0A0G2JN53 185 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 K7EPI3 171 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PCDH7O60245 1069 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SLC25A36Q96CQ1 311 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 CYP2S1Q96SQ9 504 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 POLR2J3Q9H1A7 115 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 HCN3Q9P1Z3 774 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 CYTH4Q9UIA0 394 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 C13orf42A0A1B0GVH6 325 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SRCP12931 536 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SP3Q02447 781 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ATAT1Q5SQI0 421 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 NAPRTQ6XQN6 538 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF517Q6ZMY9 492 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 EBF2Q9HAK2 575 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PARPBPQ9NWS1 579 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SLC6A4P31645 630 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 CDH15P55291 814 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 TUBA4AP68366 448 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SLC10A7Q0GE19 358 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ACOT12Q8WYK0 555 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 CNDP2Q96KP4 475 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 C12orf66Q96MD2 445 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PCDHGA11Q9Y5H2 935 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PBX1P40424 430 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PNLDC1Q8NA58 520 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PROKR2Q8NFJ6 384 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 LRRC3Q9BY71 257 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SRMSQ9H3Y6 488 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 FARSAQ9Y285 508 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PPEF2O14830 753 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ITGA10O75578 1167 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 VARSP26640 1264 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 NSG1P42857 185 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ARHGEF4Q9NR80 690 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 DNAJA1P31689 397 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 TRMT10BQ6PF06 316 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 OR5AK3PQ8NH89 298 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 FXYD6-FXYD2A0A087WZ82 144 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 KLRG2A4D1S0 409 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 POP4O95707 220 aaKnown RBP12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PAQR7Q86WK9 346 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PCBD2Q9H0N5 130 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 FXYD6Q9H0Q3 95 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 IRF2BPLQ9H1B7 796 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 CENPMQ9NSP4 180 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 J3QLW9 94 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 VNN2O95498 520 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PRNPP04156 253 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 CDH1P12830 882 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF19P17023 458 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PBX3P40426 434 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 SLC6A9P48067 706 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 DCSTAMPQ9H295 470 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
USP6NL-205ENST00000609104 ENTPD6O75354 484 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 INMTO95050 263 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 GNAO1P09471 354 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 ENGP17813 658 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 HSDL1Q3SXM5 330 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF101Q8IZC7 436 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 KLHL6Q8WZ60 621 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 FZD4Q9ULV1 537 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 AURKAO14965 403 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 NADK2Q4G0N4 442 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 TMED4Q7Z7H5 227 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 TDRPQ86YL5 185 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 NAXEQ8NCW5 288 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 C10orf82Q8WW14 230 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 TTC24A2A3L6 582 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-205ENST00000609104 ARL5CA6NH57 179 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 OAZ2O95190 189 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 TSTQ16762 297 aaKnown RBP12.8□□□□□ -0.36
USP6NL-205ENST00000609104 MOB2Q70IA6 237 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 IRGQQ8WZA9 623 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 ELOA3DA6NLF2 546 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-205ENST00000609104 ELOA3BQ3SY89 546 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 SLC37A3Q8NCC5 494 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 ELOA3Q8NG57 546 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 TMEM209Q96SK2 561 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 A0A1W2PRB8 838 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 GNAZP19086 355 aa12.8□□□□□ -0.36
USP6NL-205ENST00000609104 NPR2P20594 1047 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms