RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
TRIM11-205ENST00000602308 HGH1Q9BTY7 390 aa13.61□□□□□ -0.23
TRIM11-205ENST00000602308 TRIM7Q9C029 511 aa13.61□□□□□ -0.23
TRIM11-205ENST00000602308 TP63Q9H3D4 680 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-205ENST00000602308 NDST4Q9H3R1 872 aa13.61□□□□□ -0.23
TRIM11-205ENST00000602308 IL1RAPL1Q9NZN1 696 aa13.61□□□□□ -0.23
TRIM11-205ENST00000602308 ZNF282Q9UDV7 671 aaPredicted RBP13.61□□□□□ -0.23
TRIM11-205ENST00000602308 SNRNP200O75643 2136 aaKnown RBP13.61□□□□□ -0.23
TRIM11-205ENST00000602308 ARHGEF9O43307 516 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 MFSD11O43934 449 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 CHRM5P08912 532 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-205ENST00000602308 CD46P15529 392 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 EMP2P54851 167 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 GALNT2Q10471 571 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 MAMLD1Q13495 774 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 FASTKQ14296 549 aaKnown RBP13.6□□□□□ -0.23
TRIM11-205ENST00000602308 MAN2A1Q16706 1144 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 ACER2Q5QJU3 275 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 YOD1Q5VVQ6 348 aaPredicted RBP13.6□□□□□ -0.23
TRIM11-205ENST00000602308 PODNL1Q6PEZ8 512 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 FAM151BQ6UXP7 276 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 NT5DC3Q86UY8 548 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 LIX1LQ8IVB5 337 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 DTX3LQ8TDB6 740 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 IMMP1LQ96LU5 166 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 ZNF700Q9H0M5 742 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 OR52A5Q9H2C5 316 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 MVB12BQ9H7P6 319 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 ZNF304Q9HCX3 659 aa13.6□□□□□ -0.23
TRIM11-205ENST00000602308 IGLV3-12A0A075B6K2 115 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 LOC102723996A0A087X1L8 192 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 KLHL33A6NCF5 533 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 TRIM64A6NGJ6 449 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 TRIM64BA6NI03 449 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 USP27XA6NNY8 438 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 GAPDHSO14556 408 aaPredicted RBP13.59□□□□□ -0.23
TRIM11-205ENST00000602308 RNF8O76064 485 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 ICAM2P13598 275 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 TCF4P15884 667 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 MSH3P20585 1137 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 MAGP20916 626 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 CCNCP24863 283 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 HMGCLP35914 325 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 BOP1Q14137 746 aaKnown RBP13.59□□□□□ -0.23
TRIM11-205ENST00000602308 GRM7Q14831 915 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 TIGD7Q6NT04 549 aaPredicted RBP13.59□□□□□ -0.23
TRIM11-205ENST00000602308 ACAD11Q709F0 780 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 MCOLN2Q8IZK6 566 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 FAM98AQ8NCA5 519 aaKnown RBP13.59□□□□□ -0.23
TRIM11-205ENST00000602308 NPAS2Q99743 824 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
TRIM11-205ENST00000602308 BDH2Q9BUT1 245 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 CHMP5Q9NZZ3 219 aa13.59□□□□□ -0.23
TRIM11-205ENST00000602308 PHF3Q92576 2039 aaKnown RBP13.58□□□□□ -0.24
TRIM11-205ENST00000602308 RCCD1A6NED2 376 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 MAN1A2O60476 641 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 NEURL1O76050 574 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 SP1P08047 785 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 TPBGLP0DKB5 382 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 PEBP1P30086 187 aaKnown RBP13.58□□□□□ -0.24
TRIM11-205ENST00000602308 AKT1P31749 480 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 SOX5P35711 763 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 AP2B1P63010 937 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 DAZAP2Q15038 168 aaPredicted RBP13.58□□□□□ -0.24
TRIM11-205ENST00000602308 BCL7AQ4VC05 210 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 FLYWCH1Q4VC44 716 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 SLC25A25Q6KCM7 469 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 CNTD1Q8N815 330 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 HM13Q8TCT9 377 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 HSPH1Q92598 858 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 FATE1Q969F0 183 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 ZNF354BQ96LW1 612 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 TIGD1Q96MW7 591 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 ENAMQ9NRM1 1142 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.24
TRIM11-205ENST00000602308 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
TRIM11-205ENST00000602308 ARID1AO14497 2285 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 FFAR3O14843 346 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 GPR42O15529 346 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 PDHA2P29803 388 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 GRIA3P42263 894 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 ZFP36L2P47974 494 aaKnown RBP13.57□□□□□ -0.24
TRIM11-205ENST00000602308 EFNA3P52797 238 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 JAM2P57087 298 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 PCSK7Q16549 785 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 IFI16Q16666 785 aaKnown RBP13.57□□□□□ -0.24
TRIM11-205ENST00000602308 H3F3CQ6NXT2 135 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 CLEC17AQ6ZS10 378 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 P3H2Q8IVL5 708 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 TTC29Q8NA56 475 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-205ENST00000602308 OR10Q1Q8NGQ4 319 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 ZNF285Q96NJ3 590 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 TSGA13Q96PP4 275 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 SLC6A16Q9GZN6 736 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 GANQ9H2C0 597 aa13.57□□□□□ -0.24
TRIM11-205ENST00000602308 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms