RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 ENO4A6NNW6 628 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 E7EVH7 732 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 GOT2P00505 430 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 MAGP20916 626 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 ITGA3P26006 1051 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 CCR7P32248 378 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 TTPAP49638 278 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 PER3P56645 1201 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 SF1Q15637 639 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 FCRL6Q6DN72 434 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 AADACL2Q6P093 401 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 FIGLAQ6QHK4 219 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 PPP1R21Q6ZMI0 780 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 KIAA1328Q86T90 577 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 LRRC6Q86X45 466 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 ZNF285Q96NJ3 590 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 LMF1Q96S06 567 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 EPS8L2Q9H6S3 715 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 CUTCQ9NTM9 273 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 KLK4Q9Y5K2 254 aa17.1■□□□□ 0.33
SHKBP1-227ENST00000602011 ANKRD12Q6UB98 2062 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 FITM1A5D6W6 292 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 MASP2O00187 686 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 PRMT5O14744 637 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 RASGRF2O14827 1237 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 CNOT3O75175 753 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 PEBP1P30086 187 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 CCNFP41002 786 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 TSFMP43897 325 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 GDF10P55107 478 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 NKG7Q16617 165 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 PRMT9Q6P2P2 845 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 C4orf22Q6V702 233 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 MPP5Q8N3R9 675 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 HMGCLL1Q8TB92 370 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 LHPPQ9H008 270 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 ETNK1Q9HBU6 452 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 SLC22A11Q9NSA0 550 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 IMPACTQ9P2X3 320 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 CNTRLQ7Z7A1 2325 aa17.09■□□□□ 0.33
SHKBP1-227ENST00000602011 OR51F1A6NGY5 319 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 PCDH17O14917 1159 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 OR1I1O60431 355 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 AOAHP28039 575 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 SLC9A5Q14940 896 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 TLR1Q15399 786 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 CCDC38Q502W7 563 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 CUZD1Q86UP6 607 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 LMNTD1Q8N9Z9 388 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 LINC01555Q8NAE3 123 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 DNAJB14Q8TBM8 379 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 HES6Q96HZ4 224 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 FOPNLQ96NB1 174 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 SELENOSQ9BQE4 189 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 FBXL4Q9UKA2 621 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 PLAGL1Q9UM63 463 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 FAM169AQ9Y6X4 670 aa17.08■□□□□ 0.32
SHKBP1-227ENST00000602011 VSTM2BA6NLU5 285 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 PFDN6O15212 129 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 EDN3P14138 238 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 EMP3P54852 163 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 FOXL2P58012 376 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 OCA2Q04671 838 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 TUBB8Q3ZCM7 444 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 PCID2Q5JVF3 399 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 PTRHD1Q6GMV3 140 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 RPUSD3Q6P087 351 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 KIRREL2Q6UWL6 708 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 ZNF534Q76KX8 674 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 TMEM151BQ8IW70 566 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 PPHLN1Q8NEY8 458 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 SPSB2Q99619 263 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 SLC6A20Q9NP91 592 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 PAK5Q9P286 719 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 ZNF148Q9UQR1 794 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 R3HDM2Q9Y2K5 976 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 HS3ST3B1Q9Y662 390 aa17.07■□□□□ 0.32
SHKBP1-227ENST00000602011 ABCA12Q86UK0 2595 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 SOCS6O14544 535 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 PRICKLE3O43900 615 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 PHF2O75151 1096 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 CTSBP07858 339 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 FDXRP22570 491 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 GRB7Q14451 532 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 RBBP7Q16576 425 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 ISLR2Q6UXK2 745 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 RAD9BQ6WBX8 426 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 NAPRTQ6XQN6 538 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 KCNMB4Q86W47 210 aa17.06■□□□□ 0.32
SHKBP1-227ENST00000602011 CFAP61Q8NHU2 1237 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms