RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 LKAAEAR1Q8TD35 194 aa18.03■□□□□ 0.48
PNKP-213ENST00000599543 TRIM56Q9BRZ2 755 aaKnown RBP18.03■□□□□ 0.48
PNKP-213ENST00000599543 NDC1Q9BTX1 674 aa18.03■□□□□ 0.48
PNKP-213ENST00000599543 CARD6Q9BX69 1037 aa18.03■□□□□ 0.48
PNKP-213ENST00000599543 CHRAC1Q9NRG0 131 aa18.03■□□□□ 0.48
PNKP-213ENST00000599543 DHCR7Q9UBM7 475 aaKnown RBP18.03■□□□□ 0.48
PNKP-213ENST00000599543 CDYLQ9Y232 598 aa18.03■□□□□ 0.48
PNKP-213ENST00000599543 PTRH2Q9Y3E5 179 aaKnown RBP18.03■□□□□ 0.48
PNKP-213ENST00000599543 PCM1Q15154 2024 aa18.03■□□□□ 0.48
PNKP-213ENST00000599543 PRMT5O14744 637 aaPredicted RBP18.02■□□□□ 0.48
PNKP-213ENST00000599543 SORBS2O94875 1100 aaKnown RBP18.02■□□□□ 0.48
PNKP-213ENST00000599543 MAGP20916 626 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 CD9P21926 228 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 RAPSNQ13702 412 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 SSPNQ14714 243 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 SLC9A5Q14940 896 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 KYNUQ16719 465 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 PCID2Q5JVF3 399 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 PTRHD1Q6GMV3 140 aaKnown RBP18.02■□□□□ 0.48
PNKP-213ENST00000599543 TAX1BP1Q86VP1 789 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 CAND1Q86VP6 1230 aaKnown RBP18.02■□□□□ 0.48
PNKP-213ENST00000599543 KRT222Q8N1A0 295 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 DNAJC22Q8N4W6 341 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 LINC01555Q8NAE3 123 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 CLEC1AQ8NC01 280 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 GALNT11Q8NCW6 608 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 SPATA4Q8NEY3 305 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 SLC22A18Q96BI1 424 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 FER1L6-AS2Q96M78 137 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 PANX3Q96QZ0 392 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 CIDEBQ9UHD4 219 aa18.02■□□□□ 0.48
PNKP-213ENST00000599543 NBPF19A0A087WUL8 3843 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 CCDC188H7C350 402 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 PEX12O00623 359 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 CD3EAPO15446 510 aaKnown RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 GPC4O75487 556 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 S1PR4O95977 384 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 CTSBP07858 339 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 AOAHP28039 575 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 NMBRP28336 390 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 MAGEA6P43360 314 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 UQCRFS1P47985 274 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 NKAIN1Q4KMZ8 207 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 RNASEH2BQ5TBB1 312 aaKnown RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 JMJD6Q6NYC1 403 aaPredicted RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 LRRC8BQ6P9F7 803 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 FAM20CQ8IXL6 584 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 NAT8LQ8N9F0 302 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 OR2Y1Q8NGV0 311 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 SKA2Q8WVK7 121 aaPredicted RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 DLG3Q92796 817 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 PWWP2AQ96N64 755 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 MENTQ9BUN1 341 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 IL22Q9GZX6 179 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 SLAMF7Q9NQ25 335 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 INTS7Q9NVH2 962 aaKnown RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 EURLQ9NYK6 297 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 MARCH4Q9P2E8 410 aaPredicted RBP18.01■□□□□ 0.47
PNKP-213ENST00000599543 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 GNPTGQ9UJJ9 305 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 SLC39A10Q9ULF5 831 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 KLHL20Q9Y2M5 609 aa18.01■□□□□ 0.47
PNKP-213ENST00000599543 ICE1Q9Y2F5 2266 aa18■□□□□ 0.47
PNKP-213ENST00000599543 AP3B1O00203 1094 aa18■□□□□ 0.47
PNKP-213ENST00000599543 DNALI1O14645 258 aaPredicted RBP18■□□□□ 0.47
PNKP-213ENST00000599543 BANF1O75531 89 aa18■□□□□ 0.47
PNKP-213ENST00000599543 SLCO2B1O94956 709 aa18■□□□□ 0.47
PNKP-213ENST00000599543 IGHEP01854 428 aa18■□□□□ 0.47
PNKP-213ENST00000599543 GNLYP22749 145 aa18■□□□□ 0.47
PNKP-213ENST00000599543 VWA5B1Q5TIE3 1220 aa18■□□□□ 0.47
PNKP-213ENST00000599543 TTC23LQ6PF05 361 aa18■□□□□ 0.47
PNKP-213ENST00000599543 PPIL6Q8IXY8 311 aa18■□□□□ 0.47
PNKP-213ENST00000599543 C2orf73Q8N5S3 287 aaPredicted RBP18■□□□□ 0.47
PNKP-213ENST00000599543 OTUD6BQ8N6M0 293 aa18■□□□□ 0.47
PNKP-213ENST00000599543 OR2L8Q8NGY9 312 aa18■□□□□ 0.47
PNKP-213ENST00000599543 DENND1AQ8TEH3 1009 aa18■□□□□ 0.47
PNKP-213ENST00000599543 SLCO2A1Q92959 643 aa18■□□□□ 0.47
PNKP-213ENST00000599543 IL17FQ96PD4 163 aa18■□□□□ 0.47
PNKP-213ENST00000599543 SMAD5Q99717 465 aaKnown RBP18■□□□□ 0.47
PNKP-213ENST00000599543 RAB11FIP5Q9BXF6 653 aa18■□□□□ 0.47
PNKP-213ENST00000599543 MFRPQ9BY79 579 aa18■□□□□ 0.47
PNKP-213ENST00000599543 TREX1Q9NSU2 369 aa18■□□□□ 0.47
PNKP-213ENST00000599543 BFARQ9NZS9 450 aa18■□□□□ 0.47
PNKP-213ENST00000599543 LUZP4Q9P127 313 aa18■□□□□ 0.47
PNKP-213ENST00000599543 MAP4K5Q9Y4K4 846 aa18■□□□□ 0.47
PNKP-213ENST00000599543 RASGRF2O14827 1237 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 NDUFS3O75489 264 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 ALPPP05187 535 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 ALAS2P22557 587 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 IVDP26440 423 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 NPY2RP49146 381 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 CDK16Q00536 496 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 SF1Q15637 639 aaKnown RBP17.99■□□□□ 0.47
PNKP-213ENST00000599543 DCAF10Q5QP82 559 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 SLC6A19Q695T7 634 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 CASC4Q6P4E1 433 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 OTOAQ7RTW8 1153 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 LRRC6Q86X45 466 aa17.99■□□□□ 0.47
PNKP-213ENST00000599543 AGGF1Q8N302 714 aaeCLIP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms