RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 RAB43Q86YS6 212 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 FAM20CQ8IXL6 584 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 C2orf73Q8N5S3 287 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 ZBTB2Q8N680 514 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 NAT8LQ8N9F0 302 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 TMEM102Q8N9M5 508 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 TEX19Q8NA77 164 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 SKA2Q8WVK7 121 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 DLG3Q92796 817 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 ZNF669Q96BR6 464 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 ZNF285Q96NJ3 590 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 IP6K3Q96PC2 410 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 NDC1Q9BTX1 674 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 TXLNGQ9NUQ3 528 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 CIDEBQ9UHD4 219 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 PCDHGB7Q9Y5F8 929 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 SEC16AO15027 2179 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 GOLGA6L10A0A0M3HER8 536 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 USP1O94782 785 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 ONECUT2O95948 504 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 BDKRB1P46663 353 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 CCL11P51671 97 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 RRADP55042 308 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 THOC5Q13769 683 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 CYP2A13Q16696 494 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 CCSMST1Q4G0I0 132 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 TCTE1Q5JU00 501 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 YOD1Q5VVQ6 348 aaPredicted RBP17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 MRPL14Q6P1L8 145 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 CNSTQ6PJW8 725 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 NEK10Q6ZWH5 1172 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 SIGLEC10Q96LC7 697 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 TRIM56Q9BRZ2 755 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 SLC25A23Q9BV35 468 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 DHCR7Q9UBM7 475 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 GPN3Q9UHW5 284 aaPredicted RBP17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 KLHL20Q9Y2M5 609 aa17.22■□□□□ 0.35
CHMP2A-203ENST00000597209 MYO18BQ8IUG5 2567 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 A0A1W2PPV9 198 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 E5RI56 91 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 GOLGA8MH3BSY2 632 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 KIF5CO60282 957 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 SRPX2O60687 465 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 PSIP1O75475 530 aaKnown RBP17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 PDGFAP04085 211 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 ERGP11308 486 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 GRIA3P42263 894 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 FOXK1P85037 733 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 NKAIN1Q4KMZ8 207 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 C1orf189Q5VU69 101 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 MLIPQ5VWP3 458 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 PPIL6Q8IXY8 311 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 IFT80Q9P2H3 777 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 GALPQ9UBC7 116 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 NDOR1Q9UHB4 597 aa17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 RUVBL2Q9Y230 463 aaKnown RBP17.21■□□□□ 0.35
CHMP2A-203ENST00000597209 FER1L5A0AVI2 2057 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 CTAGE9A4FU28 777 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 FITM1A5D6W6 292 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 IGHEP01854 428 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 FOLR3P41439 243 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 CLCN7P51798 805 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 PGDP52209 483 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 CHAF1BQ13112 559 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 ARHGAP19Q14CB8 494 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 NAA25Q14CX7 972 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 LONRF1Q17RB8 773 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 KLHL38Q2WGJ6 581 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 ACSBG2Q5FVE4 666 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 RNASEH2BQ5TBB1 312 aaKnown RBP17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 FAM69BQ5VUD6 431 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 ZNF470Q6ECI4 717 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 HPS6Q86YV9 775 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 FBXO15Q8NCQ5 510 aaPredicted RBP17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 OR2L3Q8NG85 312 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 OR2A1Q8NGT9 310 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 OR9A1PQ8NGU1 263 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 OR2Y1Q8NGV0 311 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 KCNJ9Q92806 393 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 SLCO2A1Q92959 643 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 FAM114A2Q9NRY5 505 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 IL1RAPL1Q9NZN1 696 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 COMMD10Q9Y6G5 202 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 FAM169AQ9Y6X4 670 aa17.2■□□□□ 0.34
CHMP2A-203ENST00000597209 UBR5O95071 2799 aaPredicted RBP17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 A0A1B0GX78 115 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 ARHGEF33A8MVX0 844 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 MYO1CO00159 1063 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 ALBP02768 609 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 MPC1LP0DKB6 136 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 PIM1P11309 404 aaPredicted RBP17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 HSD17B2P37059 387 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 CTBP1Q13363 440 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 ATP1A4Q13733 1029 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms