RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ERVK-10P10266 1014 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 PRKAR1AP10644 381 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 ENO3P13929 434 aaPredicted RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 MAGP20916 626 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 GABRB3P28472 473 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 CBSP35520 551 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 CCR10P46092 362 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 BDKRB1P46663 353 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 ETF1P62495 437 aaKnown RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 MPP1Q00013 466 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 TIAL1Q01085 375 aaKnown RBP eCLIP12.56□□□□□ -0.4
USE1-207ENST00000596136 ARHGAP19Q14CB8 494 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 TTLL9Q3SXZ7 439 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 ATP1A1-AS1Q5TC04 95 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 FCRL6Q6DN72 434 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 LCN10Q6JVE6 187 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 RHBDD2Q6NTF9 364 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 CNSTQ6PJW8 725 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 FIGLAQ6QHK4 219 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 KIAA0408Q6ZU52 694 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 GPR135Q8IZ08 494 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 RAB42Q8N4Z0 105 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 OR2A1Q8NGT9 310 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 OR9A1PQ8NGU1 263 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 GABPB2Q8TAK5 448 aaPredicted RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 CD200R1Q8TD46 325 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 SKA2Q8WVK7 121 aaPredicted RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 APOBEC4Q8WW27 367 aaKnown RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 INPP5DQ92835 1189 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 MR1Q95460 341 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 FAM136AQ96C01 138 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 SNF8Q96H20 258 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 ZNF285Q96NJ3 590 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 RUFY1Q96T51 708 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 TRIM51Q9BSJ1 452 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 NLNQ9BYT8 704 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 CHST8Q9H2A9 424 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 CCDC68Q9H2F9 335 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 ACTL8Q9H568 366 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 IARS2Q9NSE4 1012 aaKnown RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 CIDEBQ9UHD4 219 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 PLCL2Q9UPR0 1127 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 KCNMB2Q9Y691 235 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 GCN1Q92616 2671 aaKnown RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 ANKRD12Q6UB98 2062 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 HEATR5BQ9P2D3 2071 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 B8ZZF3 427 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 E7ESA3 106 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 OR2B3O76000 313 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 AHSGP02765 367 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 CATP04040 527 aaKnown RBP12.55□□□□□ -0.4
USE1-207ENST00000596136 CTSBP07858 339 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 HSD17B2P37059 387 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 ELK3P41970 407 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 GRIA3P42263 894 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 ITGA8P53708 1063 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 POLE2P56282 527 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 RPS15P62841 145 aaKnown RBP12.55□□□□□ -0.4
USE1-207ENST00000596136 ERV3-1Q14264 604 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 SF1Q15637 639 aaKnown RBP12.55□□□□□ -0.4
USE1-207ENST00000596136 HIF1AQ16665 826 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 DEFB109BQ30KR1 87 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 C16orf46Q6P387 395 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 TLDC1Q6P9B6 456 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 SYVN1Q86TM6 617 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 FAM20CQ8IXL6 584 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 SYTL1Q8IYJ3 562 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 C2orf73Q8N5S3 287 aaPredicted RBP12.55□□□□□ -0.4
USE1-207ENST00000596136 SPATA4Q8NEY3 305 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 CLIP3Q96DZ5 547 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 CERS2Q96G23 380 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 PWWP2AQ96N64 755 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 GPR21Q99679 349 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 SPRTNQ9H040 489 aaPredicted RBP12.55□□□□□ -0.4
USE1-207ENST00000596136 FAM114A2Q9NRY5 505 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 INTS7Q9NVH2 962 aaKnown RBP12.55□□□□□ -0.4
USE1-207ENST00000596136 EURLQ9NYK6 297 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 POLHQ9Y253 713 aa12.55□□□□□ -0.4
USE1-207ENST00000596136 KRT87PA6NCN2 255 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 NDC80O14777 642 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 ZSCAN9O15535 394 aaPredicted RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 VPS26AO75436 327 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 SKIV2L2P42285 1042 aaKnown RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 RPL21P46778 160 aaKnown RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 ARL4CP56559 192 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 KCNAB2Q13303 367 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 FASTKQ14296 549 aaKnown RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 UGT8Q16880 541 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 DEFB110Q30KQ9 67 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 TEDDM1Q5T9Z0 273 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
USE1-207ENST00000596136 MCATQ8IVS2 390 aaKnown RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 APLFQ8IW19 511 aaPredicted RBP12.54□□□□□ -0.4
USE1-207ENST00000596136 OR2L3Q8NG85 312 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms