RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OR56A5P0C7T3 313 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 CD9P21926 228 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 MSNP26038 577 aaKnown RBP9.54□□□□□ -0.88
LIG1-209ENST00000596104 CTNNA2P26232 953 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 CCR7P32248 378 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 GRIA3P42263 894 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 OR1D4P47884 311 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 KCNK10P57789 538 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 ART3Q13508 389 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 NAA30Q147X3 362 aaPredicted RBP9.54□□□□□ -0.88
LIG1-209ENST00000596104 GRM7Q14831 915 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 RBBP7Q16576 425 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 PARP6Q2NL67 630 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 SYTL3Q4VX76 610 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 ZC3H12BQ5HYM0 836 aaKnown RBP9.54□□□□□ -0.88
LIG1-209ENST00000596104 FIGLAQ6QHK4 219 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 VRK3Q8IV63 474 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 SLC22A15Q8IZD6 547 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 C2orf73Q8N5S3 287 aaPredicted RBP9.54□□□□□ -0.88
LIG1-209ENST00000596104 ITLN2Q8WWU7 325 aaPredicted RBP9.54□□□□□ -0.88
LIG1-209ENST00000596104 PSMF1Q92530 271 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 NR4A3Q92570 626 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 SLC22A18Q96BI1 424 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 IL17FQ96PD4 163 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 TAAR6Q96RI8 345 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 PIH1D1Q9NWS0 290 aaKnown RBP9.54□□□□□ -0.88
LIG1-209ENST00000596104 IMPACTQ9P2X3 320 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 COPG2Q9UBF2 871 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 PCDHA3Q9Y5H8 950 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 PCM1Q15154 2024 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 CNTRLQ7Z7A1 2325 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 PRICKLE3O43900 615 aaPredicted RBP9.53□□□□□ -0.88
LIG1-209ENST00000596104 CTSVO60911 334 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 GPC4O75487 556 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 SOX11P35716 441 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 CSE1LP55060 971 aaKnown RBP9.53□□□□□ -0.88
LIG1-209ENST00000596104 RIPPLY3P57055 190 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 KLC1Q07866 573 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 TBX2Q13207 712 aaPredicted RBP9.53□□□□□ -0.88
LIG1-209ENST00000596104 TCTE1Q5JU00 501 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 ATG9BQ674R7 924 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 AADACL2Q6P093 401 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 TAX1BP1Q86VP1 789 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 CNGA4Q8IV77 575 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 DCUN1D3Q8IWE4 304 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 METTL27Q8N6F8 245 aaPredicted RBP9.53□□□□□ -0.88
LIG1-209ENST00000596104 OR1N1Q8NGS0 311 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 OR13J1Q8NGT2 312 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 OR2L8Q8NGY9 312 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 LKAAEAR1Q8TD35 194 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 ALG3Q92685 438 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 LRRC45Q96CN5 670 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 VPS50Q96JG6 964 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 SELENOSQ9BQE4 189 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 CRB3Q9BUF7 120 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 LRRC40Q9H9A6 602 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 ZNF160Q9HCG1 818 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 INTS7Q9NVH2 962 aaKnown RBP9.53□□□□□ -0.88
LIG1-209ENST00000596104 IL1RAPL1Q9NZN1 696 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 CIDEBQ9UHD4 219 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 KLK4Q9Y5K2 254 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 KLF2Q9Y5W3 355 aaPredicted RBP9.53□□□□□ -0.88
LIG1-209ENST00000596104 MAU2Q9Y6X3 613 aa9.53□□□□□ -0.88
LIG1-209ENST00000596104 POLQO75417 2590 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 IGLV3-12A0A075B6K2 115 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 A0A1W2PQ72 361 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 TARM1B6A8C7 271 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 AKR1B15C9JRZ8 316 aaPredicted RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 RASGRF2O14827 1237 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 SRPX2O60687 465 aaPredicted RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 USP1O94782 785 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 TJP3O95049 919 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 FKBP9O95302 570 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 ZGLP1P0C6A0 271 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 ACPPP15309 386 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 CARSP49589 748 aaKnown RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 TNFSF10P50591 281 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 HSPA14Q0VDF9 509 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 SF1Q15637 639 aaKnown RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 INAQ16352 499 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 FAM214AQ32MH5 1076 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 CCDC38Q502W7 563 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 WASHC2DQ5SRD0 308 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 UNC5DQ6UXZ4 953 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 ARHGEF18Q6ZSZ5 1173 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 ZNF534Q76KX8 674 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 FAM71DQ8N9W8 422 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 TTC29Q8NA56 475 aaPredicted RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 HDAC10Q969S8 669 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 C8orf44Q96CB5 159 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 RUBCNLQ9H714 662 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.52□□□□□ -0.89
LIG1-209ENST00000596104 C3orf18Q9UK00 162 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 PCDHA13Q9Y5I0 950 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 PDZD2O15018 2839 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 F8P00451 2351 aa9.52□□□□□ -0.89
LIG1-209ENST00000596104 MDC1Q14676 2089 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms