RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 ANKRD28O15084 1053 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 LSM1O15116 133 aaKnown RBP13.91□□□□□ -0.18
RANBP3-229ENST00000592771 CBFA2T3O75081 653 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 KCNH1O95259 989 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ATE1O95260 518 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ALPLP05186 524 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 OR56A5P0C7T3 313 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ZNF12P17014 697 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 NFKBIAP25963 317 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 AOAHP28039 575 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 CCR7P32248 378 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 VIPR2P41587 438 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 CASP2P42575 452 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ENTPD1P49961 510 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 GABARAPL2P60520 117 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 TRAF3Q13114 568 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 TMED1Q13445 227 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 TOP3AQ13472 1001 aaPredicted RBP13.91□□□□□ -0.18
RANBP3-229ENST00000592771 GTF2H2Q13888 395 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 MOGQ16653 247 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 FAM78AQ5JUQ0 283 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 SULT1C3Q6IMI6 304 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 GTF2H2CQ6P1K8 395 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 LETMD1Q6P1Q0 360 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 SLC2A7Q6PXP3 512 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 THAP5Q7Z6K1 395 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ZNF554Q86TJ5 538 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 SMYD1Q8NB12 490 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 HDAC2Q92769 488 aaKnown RBP13.91□□□□□ -0.18
RANBP3-229ENST00000592771 RHBDF1Q96CC6 855 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ASB16Q96NS5 453 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ACOX2Q99424 681 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 SEPHS2Q99611 448 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 RAD18Q9NS91 495 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ASIC5Q9NY37 505 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 USE1Q9NZ43 259 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 SLAMF8Q9P0V8 285 aa13.91□□□□□ -0.18
RANBP3-229ENST00000592771 TSR3Q9UJK0 312 aaKnown RBP13.91□□□□□ -0.18
RANBP3-229ENST00000592771 ABCB7O75027 752 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 SEC14L2O76054 403 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 WDR47O94967 919 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 CAPN1P07384 714 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 RPL10P27635 214 aaKnown RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 STT3AP46977 705 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 HENMT1Q5T8I9 393 aaKnown RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 GPR107Q5VW38 600 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 IL27RAQ6UWB1 636 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 TMC5Q6UXY8 1006 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 ZDHHC13Q8IUH4 622 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 OFCC1Q8IZS5 231 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 DTWD1Q8N5C7 304 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 VN1R2Q8NFZ6 395 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 RAB2BQ8WUD1 216 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 FAM83DQ9H4H8 585 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 SFXN1Q9H9B4 322 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 CHCHD3Q9NX63 227 aaKnown RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 DNAJB9Q9UBS3 223 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 BLOC1S6Q9UL45 172 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 EIF3LQ9Y262 564 aaKnown RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 SLC28A1O00337 649 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 NUAK1O60285 661 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 SCELO95171 688 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 NFATC1O95644 943 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 IL1RNP18510 177 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 AKT1P31749 480 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 MMP12P39900 470 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 HSPA7P48741 367 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 C16orf72Q14CZ0 275 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 KIAA0040Q15053 153 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 NR6A1Q15406 480 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 SKIV2LQ15477 1246 aaKnown RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 TECPR1Q7Z6L1 1165 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 C8orf59Q8N0T1 100 aaPredicted RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 TRAM1L1Q8N609 369 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 SMARCD2Q92925 531 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 TMBIM1Q969X1 311 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 CD244Q9BZW8 370 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 ING2Q9H160 280 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 IRAK4Q9NWZ3 460 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 CD84Q9UIB8 345 aa13.9□□□□□ -0.18
RANBP3-229ENST00000592771 MBD1Q9UIS9 605 aaPredicted RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 YBX2Q9Y2T7 364 aaKnown RBP13.9□□□□□ -0.18
RANBP3-229ENST00000592771 TCF20Q9UGU0 1960 aaKnown RBP13.89□□□□□ -0.19
RANBP3-229ENST00000592771 KIAA1549LQ6ZVL6 1849 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 CEP290O15078 2479 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 COL4A3Q01955 1670 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 H0Y858 1186 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 RGS14O43566 566 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 SGTAO43765 313 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 AP2A2O94973 939 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 CLIC3O95833 236 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 IL6P05231 212 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 INHBBP09529 407 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 G6PDP11413 515 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 CCNA2P20248 432 aa13.89□□□□□ -0.19
RANBP3-229ENST00000592771 GSTM2P28161 218 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms