RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MIPEPQ99797 713 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 ACAT2Q9BWD1 397 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 DPH1Q9BZG8 443 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 ULBP3Q9BZM4 244 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 UNKQ9C0B0 810 aaKnown RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 B3GNT4Q9C0J1 378 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 PRORYQ9H606 182 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 CAB39LQ9H9S4 337 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 ABCF3Q9NUQ8 709 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 NINJ2Q9NZG7 142 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 LNPEPQ9UIQ6 1025 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 RARRES3Q9UL19 164 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 TMEM184BQ9Y519 407 aaPredicted RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 MDC1Q14676 2089 aaKnown RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 A0A0J9YY10 115 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 LOC101059948A0A1B0GTJ6 334 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 TMEM150CB9EJG8 249 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 MATN2O00339 956 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 SLC16A8O95907 504 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 CATP04040 527 aaKnown RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 RHOXF2BP0C7M4 288 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 ENO3P13929 434 aaPredicted RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 LIFP15018 202 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 F8A1P23610 371 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 CCNFP41002 786 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 CYP4F2P78329 520 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 TSTA3Q13630 321 aaPredicted RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 IL11RAQ14626 422 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 KIR2DS3Q14952 304 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 SF1Q15637 639 aaKnown RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 CYP2A13Q16696 494 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PHKG1Q16816 387 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 ZXDCQ2QGD7 858 aaPredicted RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 KBTBD12Q3ZCT8 623 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 LCN10Q6JVE6 187 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 FAM45BPQ6NSW5 357 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 TTC23LQ6PF05 361 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 SLC26A11Q86WA9 606 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PPP1R3BQ86XI6 285 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 CTAGE3PQ8IX95 158 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 CACNA2D3Q8IZS8 1091 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PPM1NQ8N819 430 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 OR2A1Q8NGT9 310 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 FAM45AQ8TCE6 357 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 ZNF480Q8WV37 535 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 ANKRD49Q8WVL7 239 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 MRRFQ96E11 262 aaKnown RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 VPS39Q96JC1 886 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 RHOXF2Q9BQY4 288 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 SPRTNQ9H040 489 aaPredicted RBP11.1□□□□□ -0.63
VMP1-211ENST00000591315 RHOJQ9H4E5 214 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 SYNPO2LQ9H987 977 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PDE7BQ9NP56 450 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 FAM114A2Q9NRY5 505 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 IL17BQ9UHF5 180 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PDE10AQ9Y233 779 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 PCDHB11Q9Y5F2 797 aa11.1□□□□□ -0.63
VMP1-211ENST00000591315 KALRNO60229 2985 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 CDC7O00311 574 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 PHGDHO43175 533 aaKnown RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 CBSLP0DN79 551 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 ERGP11308 486 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 CD82P27701 267 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 OAS2P29728 719 aaKnown RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 CBSP35520 551 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 SKIV2L2P42285 1042 aaKnown RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 PNLIPRP1P54315 467 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 TUBB4BP68371 445 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 ACY1Q03154 408 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 GPS2Q13227 327 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 SLC5A12Q1EHB4 618 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.09□□□□□ -0.63
VMP1-211ENST00000591315 MANEAQ5SRI9 462 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 TMTC4Q5T4D3 741 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 FAM199XQ6PEV8 388 aaPredicted RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 FIGLAQ6QHK4 219 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 LRRC56Q8IYG6 542 aaPredicted RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 NLGN4XQ8N0W4 816 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 CARFQ8N187 725 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 SPATA6LQ8N4H0 392 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 DNAJC22Q8N4W6 341 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 IL22RA1Q8N6P7 574 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 CEP112Q8N8E3 955 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 NLGN4YQ8NFZ3 816 aaPredicted RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 GABPB2Q8TAK5 448 aaPredicted RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 HMGCLL1Q8TB92 370 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 FCRL4Q96PJ5 515 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 TEFMQ96QE5 360 aaKnown RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
VMP1-211ENST00000591315 ZPBPQ9BS86 351 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 PHACTR1Q9C0D0 580 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 SLC6A20Q9NP91 592 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 STARD5Q9NSY2 213 aa11.09□□□□□ -0.63
VMP1-211ENST00000591315 SPATA7Q9P0W8 599 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms