RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GALPQ9UBC7 116 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 TP53BP1Q12888 1972 aaPredicted RBP14.83□□□□□ -0.04
CIRBP-228ENST00000590347 HNRNPCL2B2RXH8 293 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 CLDN5O00501 218 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 SLC9A3R1O14745 358 aaPredicted RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 HPRP00739 348 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 IQCF3P0C7M6 154 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 PIRTP0C851 137 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 STAG3L1P0CL83 205 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 RYKP34925 604 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 NUDT1P36639 197 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 HTR6P50406 440 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 ATP4BP51164 291 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 RPP38P78345 283 aaKnown RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 C5orf22Q49AR2 442 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 ENKURQ8TC29 256 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 RAET1EQ8TD07 263 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 TMCO6Q96DC7 493 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 CCM2Q9BSQ5 444 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 SIK2Q9H0K1 926 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 NLKQ9UBE8 527 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 TRMT6Q9UJA5 497 aaKnown RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 FAM50BQ9Y247 325 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 MRPS7Q9Y2R9 242 aaKnown RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 POLR3HQ9Y535 204 aaPredicted RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 ALG5Q9Y673 324 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 DNAJB5O75953 348 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 LMO2P25791 158 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 STAT5BP51692 787 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 CLCN3P51790 818 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 KPNA2P52292 529 aaKnown RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 GALEQ14376 348 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 GNASQ5JWF2 1037 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 TMPRSS11AQ6ZMR5 421 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 SLC35F5Q8WV83 523 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 PDLIM5Q96HC4 596 aaKnown RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 ADARB2Q9NS39 739 aaKnown RBP14.82□□□□□ -0.04
CIRBP-228ENST00000590347 NUP50Q9UKX7 468 aa14.82□□□□□ -0.04
CIRBP-228ENST00000590347 UBA6A0AVT1 1052 aaPredicted RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 PRIM2P49643 509 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 AKR1D1P51857 326 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 DMC1Q14565 340 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 VEPH1Q14D04 833 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SGO1Q5FBB7 561 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 IER5Q5VY09 327 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 COMMD7Q86VX2 200 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 KBTBD8Q8NFY9 601 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 OR10T2Q8NGX3 314 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 APH1BQ8WW43 257 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ASB15Q8WXK1 588 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 TMEM80Q96HE8 168 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 FSD1LQ9BXM9 530 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SMURF1Q9HCE7 757 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF304Q9HCX3 659 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 AIG1Q9NVV5 245 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 PRKAB1Q9Y478 270 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SIGLEC5O15389 551 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 LRRTM2O43300 516 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SERPINF2P08697 491 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ERP29P30040 261 aaKnown RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SOX6P35712 828 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ARSDP51689 593 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 DSTNP60981 165 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SIGLEC14Q08ET2 396 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 PCBP1Q15365 356 aaKnown RBP eCLIP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 KDELC1Q6UW63 502 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SLC46A3Q7Z3Q1 461 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ZDHHC21Q8IVQ6 265 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 PPHLN1Q8NEY8 458 aaKnown RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ST13P5Q8NFI4 369 aaPredicted RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 TBL1YQ9BQ87 522 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 BARHL1Q9BZE3 327 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 IKZF3Q9UKT9 509 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 GINS2Q9Y248 185 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 GRIP1Q9Y3R0 1128 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 OR4F21O95013 312 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 MATN4O95460 622 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 MSL3P1P0C860 447 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 RPS19P39019 145 aaKnown RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 MAXP61244 160 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 POU4F1Q01851 419 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF484Q5JVG2 852 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ENTHD1Q8IYW4 607 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 SETD9Q8NE22 299 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 UTP15Q8TED0 518 aaKnown RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 RNF121Q9H920 327 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF556Q9HAH1 456 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 KRT84Q9NSB2 600 aa14.81□□□□□ -0.04
CIRBP-228ENST00000590347 COL11A1P12107 1806 aaPredicted RBP14.81□□□□□ -0.04
CIRBP-228ENST00000590347 MIA3Q5JRA6 1907 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 OR5K3A6NET4 321 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SLC16A6O15403 523 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 ADRA2AP08913 450 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 HOXA9P31269 272 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 SOX3P41225 446 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 OAZ1P54368 228 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 FADDQ13158 208 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 PRKG2Q13237 762 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 FGFBP1Q14512 234 aa14.8□□□□□ -0.04
CIRBP-228ENST00000590347 DDR2Q16832 855 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms