RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TXLNGQ9NUQ3 528 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 NDOR1Q9UHB4 597 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 GPN3Q9UHW5 284 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 TTC7AQ9ULT0 858 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 ANKRD12Q6UB98 2062 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 A0A1W2PPV9 198 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 ALOX12BO75342 701 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 AVILO75366 819 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 VAPBO95292 243 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 ONECUT2O95948 504 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 S1PR4O95977 384 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 F7P08709 466 aaPredicted RBP17.27■□□□□ 0.36
H3F3B-209ENST00000589949 RPS3P23396 243 aaKnown RBP eCLIP17.27■□□□□ 0.364e-10■■□□□ 14
H3F3B-209ENST00000589949 CXCR5P32302 372 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 EIF3BP55884 814 aaKnown RBP17.27■□□□□ 0.36
H3F3B-209ENST00000589949 MRPL49Q13405 166 aaKnown RBP17.27■□□□□ 0.36
H3F3B-209ENST00000589949 SF1Q15637 639 aaKnown RBP17.27■□□□□ 0.36
H3F3B-209ENST00000589949 VWA5B1Q5TIE3 1220 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 GALNT16Q8N428 558 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 INPP5DQ92835 1189 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 PNPLA2Q96AD5 504 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 PTERQ96BW5 349 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 FAM136AQ96C01 138 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 C17orf62Q9BQA9 187 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 TSSK1BQ9BXA7 367 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 IL22Q9GZX6 179 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 SYNPO2LQ9H987 977 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 ENAMQ9NRM1 1142 aa17.27■□□□□ 0.36
H3F3B-209ENST00000589949 TSR3Q9UJK0 312 aaKnown RBP17.27■□□□□ 0.36
H3F3B-209ENST00000589949 SPTAN1Q13813 2472 aaKnown RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 F8W8V4 182 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 KDM1AO60341 852 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 NIPSNAP2O75323 286 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 NDUFS3O75489 264 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 RPN2P04844 631 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 PPARGP37231 505 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 NPY2RP49146 381 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 TERF1P54274 439 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 FASTKQ14296 549 aaKnown RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 GBX1Q14549 363 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 MYBPC3Q14896 1274 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 TRIP13Q15645 432 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 FRMPD2BQ6IN97 320 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 CNSTQ6PJW8 725 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 SHISA6Q6ZSJ9 500 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 OVCH1Q7RTY7 1134 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 MPP5Q8N3R9 675 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 METTL27Q8N6F8 245 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 PRELID2Q8N945 189 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 OR2A1Q8NGT9 310 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 UBE2Q2Q8WVN8 375 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 LPGAT1Q92604 370 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 SLC22A18Q96BI1 424 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 SPSB2Q99619 263 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 SLAMF7Q9NQ25 335 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 CUTCQ9NTM9 273 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 STOX2Q9P2F5 926 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 CTSFQ9UBX1 484 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 GNPTGQ9UJJ9 305 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
H3F3B-209ENST00000589949 RP1L1Q8IWN7 2480 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-209ENST00000589949 ICE1Q9Y2F5 2266 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 LOC105369274A0A096LPK9 316 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 LOC102723532A0A0G2JNH3 316 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 A0A1B0GX78 115 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 FMO4P31512 558 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 OR1D4P47884 311 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 SOX8P57073 446 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 TMED2Q15363 201 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 NKG7Q16617 165 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 TYSND1Q2T9J0 566 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 EIF2S3LQ2VIR3 472 aaKnown RBP17.25■□□□□ 0.35
H3F3B-209ENST00000589949 CRB2Q5IJ48 1285 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 ANKRD22Q5VYY1 191 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 LRRC8BQ6P9F7 803 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 GSTA5Q7RTV2 222 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 OTOAQ7RTW8 1153 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 OR4N4Q8N0Y3 316 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 HMGCLL1Q8TB92 370 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 RAD51AP1Q96B01 352 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 SNRNP40Q96DI7 357 aaKnown RBP17.25■□□□□ 0.35
H3F3B-209ENST00000589949 FER1L6-AS2Q96M78 137 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 IP6K3Q96PC2 410 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 PANX3Q96QZ0 392 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 MIPEPQ99797 713 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 BFARQ9NZS9 450 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 C5AR2Q9P296 337 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 CSAG2Q9Y5P2 127 aa17.25■□□□□ 0.35
H3F3B-209ENST00000589949 FITM1A5D6W6 292 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 AGPSO00116 658 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 PEX12O00623 359 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 SOCS6O14544 535 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 DSCR3O14972 297 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 CEP104O60308 925 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 MATN4O95460 622 aa17.24■□□□□ 0.35
H3F3B-209ENST00000589949 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms