RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 KLQ9UEF7 1012 aa7.66□□□□□ -1.18
ATG4D-210ENST00000588972 AGO1Q9UL18 857 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 HBS1LQ9Y450 684 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 MYO18AQ92614 2054 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 URB1O60287 2271 aaKnown RBP7.66□□□□□ -1.18
ATG4D-210ENST00000588972 GOLGA6L7A0A1B0GV03 622 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 hCG_1807616A0A1W2PRN6 198 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TMEM200CA6NKL6 621 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 AGAP14A8MT82 685 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 NEDD8-MDP1E9PL57 170 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 PRICKLE3O43900 615 aaPredicted RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 HSF2BPO75031 334 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 GJB3O75712 270 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TJP3O95049 919 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 NXPH3O95157 252 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TRUB2O95900 331 aaKnown RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 MOCS2O96007 188 aaPredicted RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 IGLV3-25P01717 112 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 IGLV3-27P01718 113 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 DLDP09622 509 aaKnown RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 CCDC172P0C7W6 258 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 DUSP1P28562 367 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 HNF1BP35680 557 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 PRKCIP41743 596 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TNFRSF4P43489 277 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 SULT1E1P49888 294 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 SGSHP51688 502 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 ZBED6P86452 979 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF33AQ06730 810 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 KLHL30Q0D2K2 578 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 ICAM4Q14773 271 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 RAB6CQ53S08 254 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TDRD12Q587J7 1177 aaKnown RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 EFHC1Q5JVL4 640 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 SH2D4BQ5SQS7 431 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 ARMC3Q5W041 872 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 SPECC1LQ69YQ0 1117 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TENM4Q6N022 2769 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TRNP1Q6NT89 227 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TRIM72Q6ZMU5 477 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 MON1BQ7L1V2 547 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 SLC26A9Q7LBE3 791 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 LRRC56Q8IYG6 542 aaPredicted RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 EMC1Q8N766 993 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 MSANTD4Q8NCY6 345 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TNIP2Q8NFZ5 429 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 JOSD2Q8TAC2 188 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 MYEOVQ96EZ4 313 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 CAMK1GQ96NX5 476 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 SERPINB11Q96P15 392 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 BBC3Q96PG8 261 aaPredicted RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 NUP58Q9BVL2 599 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 EDEM3Q9BZQ6 932 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 RAB6CQ9H0N0 254 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 TBCCD1Q9NVR7 557 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 ASNSD1Q9NWL6 643 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 PLK2Q9NYY3 685 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 AIPL1Q9NZN9 384 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 ADAM22Q9P0K1 906 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 XPO7Q9UIA9 1087 aaKnown RBP7.65□□□□□ -1.18
ATG4D-210ENST00000588972 AMFRQ9UKV5 643 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 PLXNB3Q9ULL4 1909 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 OSGIN2Q9Y236 505 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
ATG4D-210ENST00000588972 PTPRBP23467 1997 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 IGHV1OR15-9A0A0B4J2B8 117 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 SUV39H1O43463 412 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 ZNF217O75362 1048 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 CHRM2P08172 466 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 HOXB2P14652 356 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 GABRG2P18507 467 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 PRPH2P23942 346 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 PCSK6P29122 969 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 SNX16P57768 344 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 UFM1P61960 85 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 NME3Q13232 169 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 BMPR2Q13873 1038 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 NADSYN1Q6IA69 706 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 RFWD3Q6PCD5 774 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 TMEM88Q6PEY1 159 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 SARM1Q6SZW1 724 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 KYAT3Q6YP21 454 aaKnown RBP7.64□□□□□ -1.19
ATG4D-210ENST00000588972 GLRX5Q86SX6 157 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 PHF13Q86YI8 300 aaPredicted RBP7.64□□□□□ -1.19
ATG4D-210ENST00000588972 ZDHHC17Q8IUH5 632 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 DEFB119Q8N690 84 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 TERB1Q8NA31 727 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 ZNF397Q8NF99 534 aaPredicted RBP7.64□□□□□ -1.19
ATG4D-210ENST00000588972 RP9Q8TA86 221 aaKnown RBP7.64□□□□□ -1.19
ATG4D-210ENST00000588972 OTUB2Q96DC9 234 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 PBKQ96KB5 322 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 CFAP57Q96MR6 1250 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 TRIM62Q9BVG3 475 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 BBS2Q9BXC9 721 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 HDHD5Q9BXW7 423 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 DCLK3Q9C098 648 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 USP29Q9HBJ7 922 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 CD248Q9HCU0 757 aa7.64□□□□□ -1.19
ATG4D-210ENST00000588972 ZDHHC4Q9NPG8 344 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms