RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 GFM1Q96RP9 751 aaKnown RBP17.08■□□□□ 0.33
DNMT1-215ENST00000588913 SLC38A3Q99624 504 aa17.08■□□□□ 0.33
DNMT1-215ENST00000588913 IMP3Q9NV31 184 aaKnown RBP17.08■□□□□ 0.33
DNMT1-215ENST00000588913 MED16Q9Y2X0 877 aa17.08■□□□□ 0.33
DNMT1-215ENST00000588913 MAP1BP46821 2468 aaKnown RBP17.08■□□□□ 0.32
DNMT1-215ENST00000588913 UBA6A0AVT1 1052 aaPredicted RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 MAGEA13PA6NCF6 341 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 OR5K4A6NMS3 321 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 H0Y3Z8 333 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 PRMT5O14744 637 aaPredicted RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 AHCYL1O43865 530 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 RFPL1O75677 317 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 VIPP01282 170 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 BPGMP07738 259 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 MTHFD1P11586 935 aaKnown RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 FMO4P31512 558 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 MAPK9P45984 424 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 GPR3P46089 330 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 TTPAP49638 278 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 BOP1Q14137 746 aaKnown RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 ACSBG2Q5FVE4 666 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 PHC3Q8NDX5 983 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 RSC1A1Q92681 617 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 CNTNAP3BQ96NU0 1288 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 SLC30A3Q99726 388 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 CNTNAP3Q9BZ76 1288 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 VCX3BQ9H321 246 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 IARS2Q9NSE4 1012 aaKnown RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 TPRP12270 2363 aaKnown RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 B2RBV5 119 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 CLGNO14967 610 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 NDUFS3O75489 264 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 PIAS1O75925 651 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 FESP07332 822 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 TYRP1P17643 537 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 OGNP20774 298 aaKnown RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 MXRA7P84157 204 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 ZFP36L1Q07352 338 aaKnown RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 BST1Q10588 318 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 STX3Q13277 289 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 ARMC3Q5W041 872 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 STEAP4Q687X5 459 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 RINLQ6ZS11 566 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 KCNMB4Q86W47 210 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 SCUBE1Q8IWY4 988 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 PRR11Q96HE9 360 aaPredicted RBP17.07■□□□□ 0.32
DNMT1-215ENST00000588913 TRAPPC9Q96Q05 1148 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 FAM192AQ9GZU8 254 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 PDP2Q9P2J9 529 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 ACSL5Q9ULC5 683 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 ADAMTS20P59510 1910 aa17.07■□□□□ 0.32
DNMT1-215ENST00000588913 OR56A5P0C7T3 313 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 HGFP14210 728 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 RPS3P23396 243 aaKnown RBP eCLIP17.06■□□□□ 0.321e-7■■■■■ 27.8
DNMT1-215ENST00000588913 GRK2P25098 689 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 ACADLP28330 430 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 PGGT1BP53609 377 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 GFERP55789 205 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 BIRC2Q13490 618 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 C16orf72Q14CZ0 275 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 AARS2Q5JTZ9 985 aaKnown RBP17.06■□□□□ 0.32
DNMT1-215ENST00000588913 MRNIPQ6NTE8 343 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 KIRREL3Q8IZU9 778 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 CACTIN-AS1Q8N1I8 211 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 RCBTB1Q8NDN9 531 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 CXorf40BQ96DE9 158 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 DEPDC7Q96QD5 511 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 ZNF184Q99676 751 aaPredicted RBP17.06■□□□□ 0.32
DNMT1-215ENST00000588913 FAM167BQ9BTA0 163 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 NMUR2Q9GZQ4 415 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 POT1Q9NUX5 634 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 DCDC2Q9UHG0 476 aa17.06■□□□□ 0.32
DNMT1-215ENST00000588913 IGHV5-10-1A0A0J9YXX1 117 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 KRT87PA6NCN2 255 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 LILRA5A6NI73 299 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 GLRA3O75311 464 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 GPC4O75487 556 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 CPNE6O95741 557 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 MPOP05164 745 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SLC35G4P0C7Q5 338 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SLC2A4P14672 509 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 PAMP19021 973 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 AOAHP28039 575 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 HALP42357 657 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 TIAL1Q01085 375 aaKnown RBP eCLIP17.05■□□□□ 0.32
DNMT1-215ENST00000588913 CHI3L2Q15782 390 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SPANXN3Q5MJ09 141 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 UNQ6494/PRO21346Q6UXR6 183 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 TRIM48Q8IWZ4 208 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 LMNTD1Q8N9Z9 388 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SMYD2Q9NRG4 433 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 FBXO5Q9UKT4 447 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 RUVBL2Q9Y230 463 aaKnown RBP17.05■□□□□ 0.32
DNMT1-215ENST00000588913 FTH1P02794 183 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SH3BGRP55822 239 aaPredicted RBP17.05■□□□□ 0.32
DNMT1-215ENST00000588913 ACTR3P61158 418 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 SQSTM1Q13501 440 aa17.05■□□□□ 0.32
DNMT1-215ENST00000588913 THOC5Q13769 683 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms