RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 FBXL21Q9UKT6 434 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 CRYL1Q9Y2S2 319 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 CHTOPQ9Y3Y2 248 aaKnown RBP6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 MAB21L2Q9Y586 359 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 PCDHGC4Q9Y5F7 938 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 PCDHGA6Q9Y5G7 932 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 PCDHGA5Q9Y5G8 931 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 PCDHGA1Q9Y5H4 931 aa6.34□□□□□ -1.39
AP000547.3-204ENST00000588548 CCDC163A0A0D9SF12 145 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TCRBV7S3A2A0A539 114 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TCRBV5S4A2TA0A5A2 114 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 C9orf170A2RU37 121 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FAM234BA2RU67 622 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 E9PAM4 449 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SMIM22K7EJ46 135 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SULT1C2O00338 296 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PDXKO00764 312 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FABP7O15540 132 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ADAM12O43184 909 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SLC7A4O43246 635 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 AIREO43918 545 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PRPSAP2O60256 369 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CFDP00746 253 aaPredicted RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 LDLRP01130 860 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CYBBP04839 570 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PRKCGP05129 697 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 MUC1P15941 1255 aaPredicted RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TFE3P19532 575 aaPredicted RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CD79BP40259 229 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ETV5P41161 510 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 KIR2DL3P43628 341 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 BAG6P46379 1132 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 KCNJ3P48549 501 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CASP4P49662 377 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ARSFP54793 590 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CDH4P55283 916 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FCGRTP55899 365 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 MVKQ03426 396 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 DAG1Q14118 895 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 DGCR6Q14129 220 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PRPSAP1Q14558 356 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 LARS2Q15031 903 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PUM3Q15397 648 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FAM45BPQ6NSW5 357 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 NOTUMQ6P988 496 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FAM92BQ6ZTR7 304 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CHMP1BQ7LBR1 199 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 DPPA2Q7Z7J5 298 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TMEM132CQ8N3T6 1108 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 MS4A15Q8N5U1 240 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 LRRC17Q8N6Y2 441 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TEX19Q8NA77 164 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ZNF461Q8TAF7 563 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FAM45AQ8TCE6 357 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ISL2Q96A47 359 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 RDH12Q96NR8 316 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 MAP3K3Q99759 626 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FEM1AQ9BSK4 669 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TRMOQ9BU70 441 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 REPIN1Q9BWE0 567 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FTHL17Q9BXU8 183 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 UGT2B28Q9BY64 529 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 C11orf54Q9H0W9 315 aaPredicted RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CARS2Q9HA77 564 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 IL1RAPQ9NPH3 570 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 DDX4Q9NQI0 724 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FAM118AQ9NWS6 357 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 NDUFAF4Q9P032 175 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ING4Q9UNL4 249 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 KIAA1024Q9UPX6 916 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SPATA31A5Q5VU36 1347 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SPATA31A7Q8IWB4 1347 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 MAST2Q6P0Q8 1798 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ITGB4P16144 1822 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 GSG1L2A8MUP6 293 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 LGALS8O00214 317 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CBX4O00257 560 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TCAPO15273 167 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CREG1O75629 220 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CYP7B1O75881 506 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ATG12O94817 140 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PDE8BO95263 885 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 HSPA4LO95757 839 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 IFNB1P01574 187 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TPH1P17752 444 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 RAB4AP20338 218 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ATP5A1P25705 553 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 G0S2P27469 103 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 PDHA2P29803 388 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TNFSF8P32971 234 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 RORAP35398 523 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 FXR2P51116 673 aaKnown RBP eCLIP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SLC7A2P52569 658 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 CASP9P55211 416 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ISL1P61371 349 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 ABATP80404 500 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 HOXC5Q00444 222 aa6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 SNTB1Q13884 538 aaKnown RBP6.33□□□□□ -1.4
AP000547.3-204ENST00000588548 TRIM60Q495X7 471 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms