RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TPSD1Q9BZJ3 242 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 TUBB1Q9H4B7 451 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 WDR26Q9H7D7 661 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 CD248Q9HCU0 757 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 ITM2CQ9NQX7 267 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 GPRC5BQ9NZH0 403 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 POLG2Q9UHN1 485 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 TSR3Q9UJK0 312 aaKnown RBP10.11□□□□□ -0.79
LIG3-203ENST00000585370 ZNF225Q9UK10 706 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 ACSL5Q9ULC5 683 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 MMP17Q9ULZ9 603 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 PRPF19Q9UMS4 504 aaKnown RBP10.11□□□□□ -0.79
LIG3-203ENST00000585370 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
LIG3-203ENST00000585370 SNX6Q9UNH7 406 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 ZFR2Q9UPR6 939 aaKnown RBP10.11□□□□□ -0.79
LIG3-203ENST00000585370 TIMM22Q9Y584 194 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 THADAQ6YHU6 1953 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 LAMA5O15230 3695 aa10.11□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3DA0A087WVF3 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3IA0A087WXS9 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3EA0A087X179 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3KA0A087X1G2 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 A0A1W2PQU0 124 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3FA6NER0 549 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 LRRC72A6NJI9 287 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 C4orf47A7E2U8 309 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ZNF839A8K0R7 811 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ARHGEF33A8MVX0 844 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3LB9A6J9 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 IFRD1O00458 451 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 KCNK5O95279 499 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 C1orf105O95561 183 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 PAK4O96013 591 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 PCCBP05166 539 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3HP0C7X1 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 MYCLP1P12525 358 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 PRDX3P30048 256 aaKnown RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 CPA2P48052 419 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ADPRHP54922 357 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 EMX2Q04743 252 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 DMPKQ09013 629 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 CUL3Q13618 768 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 INPP5AQ14642 412 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ST3GAL2Q16842 350 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 C18orf21Q32NC0 220 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 PTCHD3Q3KNS1 767 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ATP6AP1LQ52LC2 224 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 PDCD4Q53EL6 469 aaKnown RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 AGKQ53H12 422 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 FBXO48Q5FWF7 155 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 COQ5Q5HYK3 327 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 C10orf62Q5T681 223 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 PMS2CLQ68D20 193 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3GQ6DHY5 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3CQ6IPX1 549 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 AGTRAPQ6RW13 159 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 IL27RAQ6UWB1 636 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 HACD2Q6Y1H2 254 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 LPCAT2Q7L5N7 544 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TRIM69Q86WT6 500 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ZNF547Q8IVP9 402 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 TBC1D3Q8IZP1 549 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 POU5F2Q8N7G0 328 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 SNX31Q8N9S9 440 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 PCYOX1LQ8NBM8 494 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 PLA2G15Q8NCC3 412 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 FAM13CQ8NE31 585 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 OR52B6Q8NGF0 335 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 OR56A3Q8NH54 315 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 SETD7Q8WTS6 366 aaKnown RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 KCNA7Q96RP8 456 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ACTR8Q9H981 624 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 SGK2Q9HBY8 427 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 POLMQ9NP87 494 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 SDR39U1Q9NRG7 319 aaPredicted RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 ZIM2Q9NZV7 527 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 SERGEFQ9UGK8 458 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 BCAP29Q9UHQ4 241 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 NDUFAF1Q9Y375 327 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ASB1Q9Y576 335 aa10.1□□□□□ -0.79
LIG3-203ENST00000585370 ASCC3Q8N3C0 2202 aaKnown RBP10.1□□□□□ -0.79
LIG3-203ENST00000585370 ATP6AP2A0A1C7CYW4 349 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 LNP1A1A4G5 178 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 TMEM202A6NGA9 273 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 NPIPB8E9PQR5 432 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 CACNB4O00305 520 aaPredicted RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 MANBAO00462 879 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 CLGNO14967 610 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 ATP6AP2O75787 350 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 GPX3P22352 226 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 KELP23276 732 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 CCND1P24385 295 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 ACADLP28330 430 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 PBLDP30039 288 aaPredicted RBP10.09□□□□□ -0.79
LIG3-203ENST00000585370 NUDT1P36639 197 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 HNF4AP41235 474 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 CASP2P42575 452 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 GDF5P43026 501 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 GNPDA1P46926 289 aa10.09□□□□□ -0.79
LIG3-203ENST00000585370 PREPP48147 710 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms