RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PDLIM2Q96JY6 352 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 CAPZA3Q96KX2 299 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 TRIM55Q9BYV6 548 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 DHCR7Q9UBM7 475 aaKnown RBP20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 TP53TG5Q9Y2B4 290 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 MRFAP1Q9Y605 127 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 SPTA1P02549 2419 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 MKRN2OSH3BPM6 223 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 NR1D1P20393 614 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 PSMB5P28074 263 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 PTGIRP43119 386 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 CLCN7P51798 805 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 GNG11P61952 73 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 CHAF1BQ13112 559 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 PTK6Q13882 451 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 KLHL38Q2WGJ6 581 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 FIGLAQ6QHK4 219 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 RAB42Q8N4Z0 105 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 HMGCLL1Q8TB92 370 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 MAGEC3Q8TD91 643 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 ADAMTS17Q8TE56 1095 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 ANP32BQ92688 251 aaKnown RBP20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 GBP5Q96PP8 586 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 INTS7Q9NVH2 962 aaKnown RBP20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 PCYOX1Q9UHG3 505 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 MED16Q9Y2X0 877 aa20.62■□□□□ 0.89
PPP4R1-228ENST00000584074 ARGFXA6NJG6 315 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 ARHGEF33A8MVX0 844 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 C9J4A7 227 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 DNALI1O14645 258 aaPredicted RBP20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 BANF1O75531 89 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 SPTBP11277 2137 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 FASTKQ14296 549 aaKnown RBP20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 HSP90AA5PQ58FG0 334 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 TLDC1Q6P9B6 456 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 GIMAP7Q8NHV1 300 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 SLCO2A1Q92959 643 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 MIPEPQ99797 713 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 PYCARDQ9ULZ3 195 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 FAM169AQ9Y6X4 670 aa20.61■□□□□ 0.89
PPP4R1-228ENST00000584074 PSIP1O75475 530 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 HAUS5O94927 633 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 DCDP81605 110 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 MPP1Q00013 466 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 CUL1Q13616 776 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 SLC9A5Q14940 896 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 CYP2A13Q16696 494 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 MSS51Q4VC12 460 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 COLEC12Q5KU26 742 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 MLIPQ5VWP3 458 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 PAPD7Q5XG87 772 aaKnown RBP20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 CREG2Q8IUH2 290 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 OR2A1Q8NGT9 310 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 PROKR1Q8TCW9 393 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 NDC1Q9BTX1 674 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 CCDC68Q9H2F9 335 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 TXLNGQ9NUQ3 528 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 FBXO5Q9UKT4 447 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 SRPK3Q9UPE1 567 aa20.6■□□□□ 0.89
PPP4R1-228ENST00000584074 A0A1W2PPV9 198 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 KLF7O75840 302 aaPredicted RBP20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 PGAM1P18669 254 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 IVDP26440 423 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 YBX1P67809 324 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 DHX9Q08211 1270 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 CRYMQ14894 314 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 TCTN3Q6NUS6 607 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 KLHL7Q8IXQ5 586 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 LMNTD2Q8IXW0 634 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 OR2L3Q8NG85 312 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 OR9A1PQ8NGU1 263 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 CALML6Q8TD86 181 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 KCNJ9Q92806 393 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 ING2Q9H160 280 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 IARS2Q9NSE4 1012 aaKnown RBP20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 SPATA7Q9P0W8 599 aa20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 IFT80Q9P2H3 777 aaPredicted RBP20.59■□□□□ 0.89
PPP4R1-228ENST00000584074 TARM1B6A8C7 271 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 MYO1CO00159 1063 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 NRP2O60462 931 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 CTSVO60911 334 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 FKBP9O95302 570 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 WISP1O95388 367 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 PDGFAP04085 211 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ERVK-10P10266 1014 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ALAS2P22557 587 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 MCM3P25205 808 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 GCGRP47871 477 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 CCL11P51671 97 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 TLE1Q04724 770 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 TTLL9Q3SXZ7 439 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 NKAIN1Q4KMZ8 207 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ZC3H12BQ5HYM0 836 aaKnown RBP20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ASB18Q6ZVZ8 466 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 PCGF5Q86SE9 256 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 KCNMB4Q86W47 210 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 IGDCC3Q8IVU1 814 aa20.58■□□□□ 0.89
PPP4R1-228ENST00000584074 ZUFSPQ96AP4 578 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms